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NECEvent2014_2_3_scaffold_72_14

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(13111..15252)

Top 3 Functional Annotations

Value Algorithm Source
S1 RNA binding domain protein n=131 Tax=Clostridium difficile RepID=T3IIT8_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 713.0
  • Bit_score: 1377
  • Evalue 0.0
  • rbh
Putative S1 RNA-binding domain-containingprotein {ECO:0000313|EMBL:CEJ96654.1}; RNA-binding protein {ECO:0000313|EMBL:CKH80695.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 713.0
  • Bit_score: 1376
  • Evalue 0.0
putative S1 RNA-binding domain-containingprotein similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 713.0
  • Bit_score: 1376
  • Evalue 0.0

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2142
TTGGATATAAATCAAATCTTAAAAAAAGAGTTTAATCTTAGAGATGAACAAATAAATAATACATTAAAACTTATTGATGAAGGAAATACAATACCATTTATAGCTAGATATAGAAAAGAAATGACTGGCGAGATGAGTGATGTTACACTAAGAGAATTTTATGAAAAACTAATGTATTTGAGAAATCTTCAAAGTAGAAAAGATGATGTAGTTAGACTAATAGATGAACAAGGGAAATTAACAGATGAAATAACACAAAATATAGAAAAAGCAAAAACATTACAAGAAGTAGAAGATATATATGCTCCATATAAACAAAAGAAAAGAACTAGAGCAACAATAGCAAAAGAAAAAGGATTAGAAAATTTAGCATTGTCAATACTAGAGAATAATTTAGATAATATAGAAATAGAGGCAAAGAATTATCTTGATGAAGAGAAAGAAGTTCTTTCTATTGAAGATGCTCTAAAAGGTGCTAGAGATATAATTGCAGAACTAGTCTCAGATGATGCTAAGATTAGAAAGTATATAAGAGAATTAGCTTTAAGAGAAGGTATGATAGTTAGCAAAAGTGCTACTGATGAGAAATCGGTTTATGATATGTATTATGATTATAGCGAAGCAGTAAAAAGTATGGCTCCACATAGAGTTTTGGCAATAAACAGAGGAGAAAAAGAAAGCTTCCTAAAGGTTAAGTTGGAAATAAATAATGATAAAGTTTTAAATTACATAATAAACGAATATGTAAATGATAAAAATTTCAAAAATAAAGAAGAAATCGTAAGTTCAATAGAAGATTCTTATAAAAGATTAATTTTCCCATCAATAGAAAGAGAAATAAGAAATCATTTAACAGAAATAGCTCAAGAAAGAGCTATAAGTGTATTTGGAAAGAATGTTAAAAGTTTATTGCTTCAACCACCAGTTAAAGACAAAGTAGTTATGGGATTTGACCCTGCATTTAGAACTGGATGTAAAATAGCTGTAGTAGATAAAAATGGTAAACTACTAGATTATACAACAGTATATCCAACAGACCCTCAAAATGATGTAGAGGGAGCAAAGAAAGTTTTAAAAGGATTGATTGAAAAATACGATATAGATATAATTTCAATTGGAAATGGTACTGCATCTAGAGAATCAGAAACTTTTGTATCAGAAATGATAAAAGAAATAGATAGCGAAGTGCAGTATGTGATAGTTAGTGAAGCAGGAGCATCTGTTTATTCAGCATCTGAACTTGCAAATGAGGAACATCCAGATATAAATGTATCAATAAGAGGAGCTATATCTATAGCTAGAAGATTACAAGACCCATTAGCAGAGCTTGTAAAAATAGACCCTAAAAGTATTGGTGTTGGTCAATATCAGCATGATTTAAACAAAAAGAGATTAGAAGAAGTACTAGATGGAGTTGTTGAAGATTCTGTAAATAGTGTTGGAGTAGATTTAAATACTGCATCATACTCCCTACTAGAACATGTTGCAGGAATAAGTAAAGCTATAGCAAAAAATATAATAGCATATAGAGAAGAAAATGGAGATTTTACGTCAAGAGCACAATTGAAAAAAGTAAAAAGACTAGGACCTCAAGCATTTACTCAATGTGCTGGATTTATGAGAATCTTAGAGGGTAAAAATCCACTAGATAATACAGGTGTGCATCCTGAAAGTTATGATATATGTAAAAAAATGATTGAGATAATTGGATATTCTTTAGATGATGTAAAGAATAAGAATATAGGTGAAATAGATGAAAAAATAAAAGAAATTGGCTTGAGGGAATTAAGTGAAAAACTGGAAGTAGGACAAGTTACATTAAAAGATATTATAGCTGAAATCAAAAAACCAGGAAGAGACCCAAGAGAAGAAGGTATAAAACCTATACTTAGAACTGATGTCTTAAAAATTGAAGATATACAAGAGGGTATGACTTTAAAAGGTACAATAAGAAATGTTGTAGACTTTGGTGCATTTGTAGATATTGGAATAAAAAATGACGGATTAGTTCATAAATCAGAAATGAGTAATAGTTTTGTGAAAGACCCTATGAGTATTGTTACAGTAGGTGATATAGTAGATGTAAAAGTCATTGGAATTGACTTAAACAAAAAAAGAGTTGCCTTATCAATGAAAAAATAG
PROTEIN sequence
Length: 714
LDINQILKKEFNLRDEQINNTLKLIDEGNTIPFIARYRKEMTGEMSDVTLREFYEKLMYLRNLQSRKDDVVRLIDEQGKLTDEITQNIEKAKTLQEVEDIYAPYKQKKRTRATIAKEKGLENLALSILENNLDNIEIEAKNYLDEEKEVLSIEDALKGARDIIAELVSDDAKIRKYIRELALREGMIVSKSATDEKSVYDMYYDYSEAVKSMAPHRVLAINRGEKESFLKVKLEINNDKVLNYIINEYVNDKNFKNKEEIVSSIEDSYKRLIFPSIEREIRNHLTEIAQERAISVFGKNVKSLLLQPPVKDKVVMGFDPAFRTGCKIAVVDKNGKLLDYTTVYPTDPQNDVEGAKKVLKGLIEKYDIDIISIGNGTASRESETFVSEMIKEIDSEVQYVIVSEAGASVYSASELANEEHPDINVSIRGAISIARRLQDPLAELVKIDPKSIGVGQYQHDLNKKRLEEVLDGVVEDSVNSVGVDLNTASYSLLEHVAGISKAIAKNIIAYREENGDFTSRAQLKKVKRLGPQAFTQCAGFMRILEGKNPLDNTGVHPESYDICKKMIEIIGYSLDDVKNKNIGEIDEKIKEIGLRELSEKLEVGQVTLKDIIAEIKKPGRDPREEGIKPILRTDVLKIEDIQEGMTLKGTIRNVVDFGAFVDIGIKNDGLVHKSEMSNSFVKDPMSIVTVGDIVDVKVIGIDLNKKRVALSMKK*