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NECEvent2014_2_3_scaffold_77_7

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(6652..6948)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=5 Tax=Clostridium difficile RepID=D5Q2H3_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 98.0
  • Bit_score: 187
  • Evalue 7.20e-45
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 98.0
  • Bit_score: 187
  • Evalue 1.00e-44
rpsT; 30S ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 88.0
  • Bit_score: 166
  • Evalue 3.70e-39

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 297
ATGATAAAAAAATACAGGGAGGTGAACACGGTGGCAAATATAAAATCAGCTAAGAAAAGAATAAGTGTTATCGAAAAGAAAACTGCTTTAAATAGAGTTAGAAAATCTCAAATAAAAACTGCAATAAGAAGATTCGAAGATGCTGTTGCAGCTGGAAACAGAGAGGATGCTGTTGCTAAGTTCCAATACGCTCAAAAAAGAATATACCAAGTAGCTTCTAAAGGAACTATACATAAGAATGCTGCAGCTAGAAAAGTAGCTAAATTAGCTCAAAAATTAAACGGTATGAACGCTTAA
PROTEIN sequence
Length: 99
MIKKYREVNTVANIKSAKKRISVIEKKTALNRVRKSQIKTAIRRFEDAVAAGNREDAVAKFQYAQKRIYQVASKGTIHKNAAARKVAKLAQKLNGMNA*