ggKbase home page

NECEvent2014_2_3_scaffold_78_25

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 34680..35582

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 300.0
  • Bit_score: 594
  • Evalue 2.20e-167
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoc similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 300.0
  • Bit_score: 594
  • Evalue 1.10e-166
Pseudouridine synthase n=40 Tax=Clostridium difficile RepID=T3I2N4_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 300.0
  • Bit_score: 595
  • Evalue 3.50e-167
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 903
TTGTTTAAAAAAGAGAATCAAAGATATAATCTTATATCGTATACAAATGAAGAAGAAATGACTTTAAAAGAAGTTTTATTGGACAAGCTAAATTTCTCAGTTAGGTCATTATCAAAAATGAAGAGGGAAAAGAGTGTTTTAGTAAATGGAGTATATAAAAAACCGAGTTTAAAGGTGTATAGTGGTGATTTAATAGAAGTAAAAATATACGAGGAAAAAGCAAATTTTGAACCTCAAGATTTAAATTTACAGATAATTTATGATGATTTTGATATAATTATGGTGAATAAACCTCCGTTTATGGTAGTTCACCCAACAAAAAGCCACTATGATAAAACAATAGCAAATGGTATTAGTTACTATATAGATAATCAAAAAGAAAACGTAAAAATAAGATTTGTAAATAGGTTAGATATGAATACTTCAGGGTTAGTTATAGTAGCAAAAAATGCTTATGCACATCATACTTTGTCTACAGCAATGAGTGAAAATAAAGTTGAAAAAAAGTATATAACAGTAGTTGATGGAATTATAAAAGAAAATGAGGGAACTATAGATGAGCCAATTTATAGACCTACAGAAGATTCAATAAAGAGGATAATAGATGAAAGAGGACAGTCATCTGTTACTCACTATAAAGTAATAGAAAGACTAGAAAATGCAACTGTATTAGAAGTAAGCTTAGAAACTGGTAGAACACATCAAATAAGAGTACATATGGCTCATATAGGTCATGGAATAATAGGTGATGAGTTGTATGGTTATGTAGATGAAGAGCTAATAAATAGGCAAGCACTTCATGCATATAAGTTAGAGTTTGAACAACCAAGAACAAAAGAAAAATTGAAATTTAAAGCAGATATACCAGAGGATATGAAAGAGTTAATATCGAAATTAAGATAA
PROTEIN sequence
Length: 301
LFKKENQRYNLISYTNEEEMTLKEVLLDKLNFSVRSLSKMKREKSVLVNGVYKKPSLKVYSGDLIEVKIYEEKANFEPQDLNLQIIYDDFDIIMVNKPPFMVVHPTKSHYDKTIANGISYYIDNQKENVKIRFVNRLDMNTSGLVIVAKNAYAHHTLSTAMSENKVEKKYITVVDGIIKENEGTIDEPIYRPTEDSIKRIIDERGQSSVTHYKVIERLENATVLEVSLETGRTHQIRVHMAHIGHGIIGDELYGYVDEELINRQALHAYKLEFEQPRTKEKLKFKADIPEDMKELISKLR*