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NECEvent2014_2_3_scaffold_100_12

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(13468..14007)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=220 Tax=Clostridium difficile RepID=C9XMH9_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 364
  • Evalue 4.60e-98
  • rbh
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 364
  • Evalue 1.30e-98
Putative transcriptional regulator, HTH {ECO:0000313|EMBL:CCL29043.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 364
  • Evalue 6.50e-98

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
ATGGATATAGGTGAAAAGATAAAAAGATTAAGAACAGAAAAACAACTGACCCAGGAAGAGTTAGCTAATAGATGTGAATTGTCAAAGGGATTTATTTCTCAATTAGAAAATAACTTAACATCACCATCCATAGCTACCCTTATAGATATACTTGAAATACTAGGTACAAATTTAAGGGAATTTTTTAATGAAATAGATGATGAAAGAATCAGTTTTACAAAAGAAGATATGTTTGAAACTGAAGATGAAGATTTAAAATATAAATTAAAGTGGTTAATTCCAAATTCACAAAAAAATGAAATGGAGCCAATAATAATAACATTGTATCCAGGAGGACAGTATAAAGAAGAAAAGCCACATGAAGGTGAAGAATTTGGATATGTATTAGCAGGTTCAATATATGTCCATATAGGCGAAAAGAAAAATAAAGTAAAAAAAGGAGAGAGTTTTTACTTTAGACCGAAAGCAAATCACTATATATCAAACGAGGGCAAAACTACAGCAAAAGTGATTTGGGTAAGTACGCCACCATCATTTTAG
PROTEIN sequence
Length: 180
MDIGEKIKRLRTEKQLTQEELANRCELSKGFISQLENNLTSPSIATLIDILEILGTNLREFFNEIDDERISFTKEDMFETEDEDLKYKLKWLIPNSQKNEMEPIIITLYPGGQYKEEKPHEGEEFGYVLAGSIYVHIGEKKNKVKKGESFYFRPKANHYISNEGKTTAKVIWVSTPPSF*