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NECEvent2014_2_3_scaffold_105_20

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(21282..22067)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=56 Tax=Clostridium difficile RepID=T3G758_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 261.0
  • Bit_score: 520
  • Evalue 9.60e-145
  • rbh
Transcriptional regulator, RpiR family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 261.0
  • Bit_score: 520
  • Evalue 2.70e-145
Phosphosugar-binding transcriptional regulator {ECO:0000313|EMBL:CKG85021.1}; Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CEJ99700.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 261.0
  • Bit_score: 520
  • Evalue 1.30e-144

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 786
ATGAGATTAGAAGAAATGATTTTTTTTAATTATAATAAATTGAATGATACAGATTTATTAATATGGAAATATATAACTGCAAATAAAAAACATTGTAGTAAGATGTCAATAAATGAACTTGCTATGAAATGTAATGTGTCTCGTGCAACTATTACAAGATTTGTTAAAAAATTAGATTTAAAAGGTTTCAGTGAGTTTAAAGTATTATTAAGCTGGGAATCAGAAAAGGTTCATGTCATAGAAAATCAGTCATTTGATATTGCATGTAATTCAATAATTAAGTATGTTGAAGATCAAAAAAATAAAGATTATGATGCATTGTGTAAACTTCTTTATGAATCAAGAACAATATACGCTTATGGTTCAGGTGATATTCAAAATGTGGTTGCAAAACAGATAAAGAGAATGTTCTTATCATGTCAAGAAATAATATATGATTTTGAGGGAAGAACATTTGATGATTCTTTTTACAATATTGTCAGTAAAAATGATGTTATGATTATTATATCTCTAAGTGGTGAGAATGAGAATACACTTAATATTGCTAGAAGATTAAAATTAATAGGAACTAAAATAATTTCAATTACAGAGTTTAAAAATAATACATTGACTGATTTAAGTGATGAATCAATTTATATTTCAGCGACTAATATCTCATTTTTACAAATGCACCCTAGTTATAAATTGACAATGTTATATTTTATATTGATTGAGTTATTATTTATTAAATATAGTATTTATAAAAGGCATAGAATGATTACAGAAGGGATTGATTGCAAATTGTAG
PROTEIN sequence
Length: 262
MRLEEMIFFNYNKLNDTDLLIWKYITANKKHCSKMSINELAMKCNVSRATITRFVKKLDLKGFSEFKVLLSWESEKVHVIENQSFDIACNSIIKYVEDQKNKDYDALCKLLYESRTIYAYGSGDIQNVVAKQIKRMFLSCQEIIYDFEGRTFDDSFYNIVSKNDVMIIISLSGENENTLNIARRLKLIGTKIISITEFKNNTLTDLSDESIYISATNISFLQMHPSYKLTMLYFILIELLFIKYSIYKRHRMITEGIDCKL*