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NECEvent2014_2_3_scaffold_108_25

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(30208..30879)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, gntR family protein n=106 Tax=Clostridium difficile RepID=T3G8K4_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 444
  • Evalue 5.70e-122
  • rbh
Transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 444
  • Evalue 1.60e-122
GntR family transcriptional regulator {ECO:0000313|EMBL:CKH88071.1}; Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDS88545.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 444
  • Evalue 8.00e-122

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
ATGGCTACATTTAAAAGATTACAAGAACAAGCATATGACTACTTAAAAGAATTGATACTATCTGGAGAAATGATAGAAAATGAAATATATTCTGAAACAAAACTTGCTAGTGAAATAGGTATCTCTAGAACACCTATAAGAGATGCTCTTCAAAGACTTAGTCAAGATGGATTTATAGATATAATCCCAAGCAAAGGATTTAGAATCCATCAAATTACAGCAAATGAAATTGTAGAGATATTCCAAATACGCTCTGCAATAGAAGGGTTTTGTACTTTTTTAATTACAAGTCAATACAAAGAAGCTAGAGCAGTAGAAACTATAAGTAAATTAAAACATCTTTTAGATAAACAAAAAGATATTTTATTAGGTGATAAAAATTTAAACTCATTTGCAGAATACGATACATTATTTCACACAACTATAGTTTCATATGCTCAAAATACTGAATTTGACAAAATGTTTAACAATTATATGTACAGAATAAAAAAATTAGCTCTCGATTCATTGTCACATGAAGGAAGGCTTGAAACAACATTAAAAGAGCACACAGATATTTTTAATAATATTGCAAATGGATGTATTGAAGATATTTACAGAACTACTCTCATTCATATGGAAACTCCTAAATACATTAATTTAGAAGATTTTTGTAACAATAAGTTATTTTAG
PROTEIN sequence
Length: 224
MATFKRLQEQAYDYLKELILSGEMIENEIYSETKLASEIGISRTPIRDALQRLSQDGFIDIIPSKGFRIHQITANEIVEIFQIRSAIEGFCTFLITSQYKEARAVETISKLKHLLDKQKDILLGDKNLNSFAEYDTLFHTTIVSYAQNTEFDKMFNNYMYRIKKLALDSLSHEGRLETTLKEHTDIFNNIANGCIEDIYRTTLIHMETPKYINLEDFCNNKLF*