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NECEvent2014_2_3_scaffold_93_22

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(21987..23312)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 441.0
  • Bit_score: 868
  • Evalue 4.40e-249
Ribosomal RNA small subunit methyltransferase n=175 Tax=Clostridium difficile RepID=C9XMU9_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 441.0
  • Bit_score: 868
  • Evalue 3.20e-249
  • rbh
rsmB; ribosomal RNA small subunit methyltransferase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 441.0
  • Bit_score: 868
  • Evalue 8.90e-250

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1326
ATGGATGCAAGAGAAGTTGGATTTAAAGTATTATGTGATATAGAAAAAAATGACAATTATTCAAATATTGCAATAAATAAGCATTTTAAAAATTTAGAAATAAGTGATATGGATAGAGGACTTGCAACAGAGTTAATTTATGGAGTAATAGAAAATAAATATTATTTAGATTATATAATCAATAAACTTTCAAAAATAAAGGTAAAAAAAATGTCAACTTATGTTAAAATCTTTTTAAGAATGGGAACATATCAGATTTTATTTTTAGATAGTATATCAGATTATGCAGCAGTTAATGAAACTGTAAAATTATCTAAGAAATATGATAAAAAATCTTCTGGTTTCATAAATGCTATTCTTAGAAATGAAATAAGAGCTAAAGAGACTATAATGGACATAACTGAGGAAGATAGTGTAAAATACTTATCTATAAAGTATTCCTATAACTCTTGGATTATAAAAAACTGGATAGATAAATTTGGACAAGAATTTGCTGAAGATTTGTTGGAAGCAAATAATGAAAAGCCTAGTATCTATATAAGAACGAATACACTTAAAATAAGTAGAGAAGAGCTTATTGAAAAATTAAGTGAAATGGGTATTGTATGTTTAAAAGTTCCTATGGTAGAAGAAGCTATTAAAGTCGAAAAAATGAAAAATATAGAAAAAAATGAATTATTTAAGGCTGGTTTATTTACAATTCAAGATATAAGTTCTATGATAGTAGGGAAAGTAATTAATCCAAAAGAAGGTTCATTTGTTTTGGATGTATGTAGTGCTCCTGGAGGGAAATCTACTCACTTAGCTACTTTAATGAACAATACTGGTCAAGTAGTAGCTAGAGATATTTTTGAGCATAAACTAAAGCTTATAAACTCTACTGTAAATAGATTGGGGCTTAAAAATGTGTTTGTAGAAAGATTTGATGCTTCTGAGATTGATGAAAATAGTATAAGTAAATTTGATTATGTTTTAGCAGATGTTCCTTGCTCTGGTTTTGGTATAATAAGACGTAAACCAGAAATTAAGTATAAGAAAGAAGAAGAGTTAAAAGACATCACTTCTATACAAAAGAAAATTTTAGAAAATGCATCTAAATATGTCAAAGTTGGTGGAACTTTAGTATATAGTACATGTACAATTCAAGATGTGGAGAATATAAATATAGTTACTTCTTTTGTTGAAGAAAATCACAACTTTGAATTTGTTCCAATTGATACAGTAAATGTAGACTTAGACAATCAAGATAAAGGATATTTAAAGATATATCCTAATATTCATGGTATAGATGGTTTTTTCATAGCAAAATTAAAGAGAATAAGGTAG
PROTEIN sequence
Length: 442
MDAREVGFKVLCDIEKNDNYSNIAINKHFKNLEISDMDRGLATELIYGVIENKYYLDYIINKLSKIKVKKMSTYVKIFLRMGTYQILFLDSISDYAAVNETVKLSKKYDKKSSGFINAILRNEIRAKETIMDITEEDSVKYLSIKYSYNSWIIKNWIDKFGQEFAEDLLEANNEKPSIYIRTNTLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFTIQDISSMIVGKVINPKEGSFVLDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLINSTVNRLGLKNVFVERFDASEIDENSISKFDYVLADVPCSGFGIIRRKPEIKYKKEEELKDITSIQKKILENASKYVKVGGTLVYSTCTIQDVENINIVTSFVEENHNFEFVPIDTVNVDLDNQDKGYLKIYPNIHGIDGFFIAKLKRIR*