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NECEvent2014_2_3_scaffold_179_29

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(27569..27925)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=115 Tax=Clostridium difficile RepID=RL20_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 1.20e-57
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 3.30e-58
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 1.60e-57

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
ATGGCAAGAGTTAAAAAAGCTATGAACGCTCGTAAAAAGCATAAGAAAATATTAAAACTTGCAAAAGGATTCAGAGGATCTAGAAGCAAATTATATAGACCAGCAAATACATTCGTAATGAAAGCATTAAAAAATGCTTATATAGGAAGAAAGTTAAAGAAGAGAGACTTCAGAAAACTTTGGATACAAAGAATAAATGCAGCTGCTAGAATGAATGGAATATCTTATTCAAGATTAATGAATGGATTAAAATTATCTGGTGTTGAAGTTAACAGAAAAATGTTATCTGAAATGGCTATACAAGACCCAGAAGGATTTGCAAAATTAGCAGAAGTTGCTAAAGCAAAATTAGCTTAG
PROTEIN sequence
Length: 119
MARVKKAMNARKKHKKILKLAKGFRGSRSKLYRPANTFVMKALKNAYIGRKLKKRDFRKLWIQRINAAARMNGISYSRLMNGLKLSGVEVNRKMLSEMAIQDPEGFAKLAEVAKAKLA*