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NECEvent2014_2_3_scaffold_238_20

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(18062..18262)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=89 Tax=Clostridium difficile RepID=C9XL88_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 133
  • Evalue 1.10e-28
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 133
  • Evalue 3.10e-29
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CCK91071.1}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 133
  • Evalue 1.50e-28

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 201
ATGCCCAAATTCATTTGTAACCTAAAAAAATATAGACAATTAAAAGAATTAACTCAAGAACAATTAGCAGAAAAAGTAGGAGTTAGAAGAGAAACCATTATGCGTTTAGAAGCAGGAAAGTATAATCCTTCTTTGAAATTAGCAATAGATATATCAAAAATAGTAGATACACCTATTGATGAATTGTTTATTTTTGATTAG
PROTEIN sequence
Length: 67
MPKFICNLKKYRQLKELTQEQLAEKVGVRRETIMRLEAGKYNPSLKLAIDISKIVDTPIDELFIFD*