ggKbase home page

NECEvent2014_2_3_scaffold_144_16

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 13885..14796

Top 3 Functional Annotations

Value Algorithm Source
Binding--dependent transport system inner membrane component family protein n=135 Tax=Clostridium difficile RepID=T3I2D9_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 587
  • Evalue 9.60e-165
  • rbh
oppC; oligopeptide family ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 587
  • Evalue 2.70e-165
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQE68471.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 587
  • Evalue 1.40e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 912
ATGAAGCCACAATATAGTGATTTTGAAATTGTAGGAGAAAATTATATTTTAGTAGCAGAAGATGAACATATAGAAACAAAGAAAACCTTATCTAAAAAAATTAAAGAATTACCATATATATCAATTATTATTTTATCAATCATAGTCATTGGAAGTGTATTCTCATCTTTTATAATGACACATGAACCAACATACATGGATTTAGCAAGTTCTAATTTAGCTCCAAATAAAACTTTTTTATTTGGAACAGACTCAATGGGTAGAGATATATATTCTATGATATGGTATGGAGGAAAAATATCTTTATTTATAGGACTATTTTCCACTGTAATATCAACTGTTATAGGAATTGTTTATGGTAGTATAAGTGGTTCAGCATCTGAACTTGTAGATGATGCAATGATGAGGTTTACAGAAATCATACTTAGTATACCTTCAATATTAATTATAATATTTGTACAAGCTATACTTGGAAATTCAAATCCAGTATCTATGTCCATAGTAATAGGGATAACAAGTTGGATGAATATATCTAAGATAGTGAGAACAGAAGTTAGACAAATAAAAAATAGCGAATACATACTAGCAGCTAAGAGCATGGGAGGAGGATTCTTCTATGTATTAAAGCAACATTTACTTCCAAATTTTGTGGCATCAATAATGTTCATGGTTGTAACAAACATAGGCGCAGCTATTGGTACTGAATCGACACTTAGCTTTTTAGGAATTGGTTTACCAATAGAAATTGTTTCTTGGGGAAGCATGTTATCTTTGTCGGAGGAAGCATTACTTTCAAATAGATGGTGGATTATACTGATTCCGGGTATATTTTTGGTTACCACATTGGTGTGTATAACAAATATAGGTAATTATATAAGAAAGAATAATAATAAAAAATCTAGTAATTTATAA
PROTEIN sequence
Length: 304
MKPQYSDFEIVGENYILVAEDEHIETKKTLSKKIKELPYISIIILSIIVIGSVFSSFIMTHEPTYMDLASSNLAPNKTFLFGTDSMGRDIYSMIWYGGKISLFIGLFSTVISTVIGIVYGSISGSASELVDDAMMRFTEIILSIPSILIIIFVQAILGNSNPVSMSIVIGITSWMNISKIVRTEVRQIKNSEYILAAKSMGGGFFYVLKQHLLPNFVASIMFMVVTNIGAAIGTESTLSFLGIGLPIEIVSWGSMLSLSEEALLSNRWWIILIPGIFLVTTLVCITNIGNYIRKNNNKKSSNL*