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NECEvent2014_2_3_scaffold_314_12

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 13951..14376

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=183 Tax=Clostridium difficile RepID=C9XII5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 141.0
  • Bit_score: 279
  • Evalue 1.50e-72
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 141.0
  • Bit_score: 279
  • Evalue 2.10e-72
rpsL; 30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 140.0
  • Bit_score: 277
  • Evalue 1.60e-72

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 426
ATGATGCCAACAATTAACCAATTAGTTCGTAAAAGTAGAAAAGCGCTAGAGAAGAAATCTACTGCTCCAGCATTACAAAAAGGTTACAACTCTTTAAATAAGAAAGTAACTGACGCTAGTGCCCCACAAAAAAGAGGGGTTTGTACTTCAGTAAAAACAGTTACTCCTAAGAAGCCTAACTCAGCTTTAAGAAAAGTTGCCAGAGTTAGATTAACTAATGGTATAGAAGTTTCTGCTTATATACCAGGAGAAGGACACAACTTACAAGAGCATAGTGTTGTTCTTATAAGAGGAGGAAGAGTAAAAGACCTTCCAGGGGTTAGATACCATATACTAAGAGGTACTCTAGATACAGCAGGTGTTGATAAGAGAAGACAATCAAGATCTAAATACGGTGCGAAGAGACCTAAAGAAGCTAAAAAGTAA
PROTEIN sequence
Length: 142
MMPTINQLVRKSRKALEKKSTAPALQKGYNSLNKKVTDASAPQKRGVCTSVKTVTPKKPNSALRKVARVRLTNGIEVSAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHILRGTLDTAGVDKRRQSRSKYGAKRPKEAKK*