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NECEvent2014_2_3_scaffold_316

Alias: 172_003_scaffold_316

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_316_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..172
DNA (171bp) protein (57aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ52_9FIRM
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EFR32919.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus har
NECEvent2014_2_3_scaffold_316_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

111..3659
DNA (3549bp) protein (1183aa)
Chromosome partition protein Smc n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ51_9FIRM rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus hare
putative SMC family, C-domain protein
NECEvent2014_2_3_scaffold_316_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3669..4964
DNA (1296bp) protein (432aa)
Signal recognition particle receptor FtsY n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ50_9FIRM rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiale
signal recognition particle-docking protein FtsY
NECEvent2014_2_3_scaffold_316_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5462..5797
DNA (336bp) protein (112aa)
Helix-turn-helix protein, YlxM/p13 family n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ49_9FIRM
UPF0122 protein HMPREF9286_0767 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei
hypothetical protein
NECEvent2014_2_3_scaffold_316_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5809..7146
DNA (1338bp) protein (446aa)
Signal recognition particle protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ48_9FIRM rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pept
ffh; Signal recognition particle protein
NECEvent2014_2_3_scaffold_316_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7196..7495
DNA (300bp) protein (100aa)
30S ribosomal protein S16 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ47_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-1
hypothetical protein
NECEvent2014_2_3_scaffold_316_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7516..7749
DNA (234bp) protein (78aa)
UPF0109 protein HMPREF9286_0764 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ46_9FIRM
UPF0109 protein HMPREF9286_0764 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei
hypothetical protein
NECEvent2014_2_3_scaffold_316_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7736..8254
DNA (519bp) protein (173aa)
Ribosome maturation factor RimM n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ45_9FIRM rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus
16S rRNA processing protein RimM
NECEvent2014_2_3_scaffold_316_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8236..8979
DNA (744bp) protein (248aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.228)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ44_9FIRM rbh
NECEvent2014_2_3_scaffold_316_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8966..9340
DNA (375bp) protein (125aa)
50S ribosomal protein L19 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ43_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" so
ribosomal protein L19
NECEvent2014_2_3_scaffold_316_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9384..11018
DNA (1635bp) protein (545aa)
SH3 domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ42_9FIRM rbh
SH3 domain protein {ECO:0000313|EMBL:EFR32934.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.
family 18 glycosyl hydrolase
NECEvent2014_2_3_scaffold_316_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11085..11738
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ41_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32873.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
hypothetical protein
NECEvent2014_2_3_scaffold_316_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11793..12788
DNA (996bp) protein (332aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0
asnA; Aspartate-ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ40_9FIRM rbh
NECEvent2014_2_3_scaffold_316_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12872..13633
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ39_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32945.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
hypothetical protein
NECEvent2014_2_3_scaffold_316_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13681..14166
DNA (486bp) protein (162aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ38_9FIRM rbh
NECEvent2014_2_3_scaffold_316_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14166..14768
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
ruvA; crossover junction ATP-dependent DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ37_9FIRM rbh
NECEvent2014_2_3_scaffold_316_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14755..15756
DNA (1002bp) protein (334aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridial
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ36_9FIRM rbh
NECEvent2014_2_3_scaffold_316_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15758..15901
DNA (144bp) protein (48aa)
Putative amidase enhancer n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ35_9FIRM
Putative amidase enhancer {ECO:0000313|EMBL:EFR32895.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V
Displaying 18 items

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