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NECEvent2014_2_5_scaffold_118_2

Organism: NECEvent2014_2_5_Peptoclostridium_difficile_31_7

near complete RP 45 / 55 BSCG 47 / 51 ASCG 13 / 38 MC: 2
Location: comp(389..808)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9H8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 281
  • Evalue 4.00e-73
DNA-directed RNA polymerase specialized sigma subunit similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 281
  • Evalue 1.10e-73
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:CBL37706.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 281
  • Evalue 5.60e-73

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Taxonomy

Sequences

DNA sequence
Length: 420
ATGAAACCGTCTGACTTCCAGAAAACAGTTCAATGTCGTTTTGAAAGTTGTTTAAAGAAAGTTGTTCGTAGTGTCGTGAAAGATTATTACAAGGAATTAAACCGTCGTAAGAATAAAGAAATATCTTTCAGCGAATTGCCAGATGTCCTTGTTGATAAAATGGCTGTTTGGGACGACTACGAAACAGATTATACAATCTTTTCAGTATGTGGCATTGATATTCGTGTCCTTGATGATGAATTGGCAGAAGCCTTGAAGAAACTTCCAGAAAGAAAACGCAATACTCTGTTGATGTATTACTTCTTGGAAATGACAGAAAGTGAAATTGCCAACTTGCAGAAAATCACGCAAAGCGGTGTATTTAGAAACCGACATCACGCTTTGGAAACTATGAAAAAAATACTCAAGGAGGAACATTAG
PROTEIN sequence
Length: 140
MKPSDFQKTVQCRFESCLKKVVRSVVKDYYKELNRRKNKEISFSELPDVLVDKMAVWDDYETDYTIFSVCGIDIRVLDDELAEALKKLPERKRNTLLMYYFLEMTESEIANLQKITQSGVFRNRHHALETMKKILKEEH*