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NECEvent2014_3_3_scaffold_279_5

Organism: NECEvent2014_3_3_Citrobacter_KTE32-rel_52_94_partial

partial RP 35 / 55 MC: 3 BSCG 32 / 51 ASCG 12 / 38 MC: 2
Location: comp(4417..5307)

Top 3 Functional Annotations

Value Algorithm Source
D-ribose-binding periplasmic protein n=10 Tax=Enterobacteriaceae RepID=C1ME68_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 564
  • Evalue 6.50e-158
  • rbh
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:ETX61721.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 564
  • Evalue 9.20e-158
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 296.0
  • Bit_score: 560
  • Evalue 2.70e-157

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGAACATGAAAAAACTGGCTACCCTGGTTTCTGCTGTTGCGCTGAGCGCCACCGTGAGCGCGAATGCGATGGCGAAAGATACCATTGCGCTGGTGGTCTCCACCCTTAACAATCCGTTCTTTGTTTCTTTGAAGGACGGGGCGCAAAAAGAGGCCGATAAGCTGGGCTACAACCTGGTGATTCTGGACTCACAGAACAACCCGGCGAAAGAGCTGGCTAACGTTCAGGATTTAACGGTTCGTGGAACTAAAATTCTGCTGATTAACCCGACAGACTCCGATGCTGTTGGTAACGCTGTGAAGATGGCTAACCAGGCGAAAATTCCGGTTATCACCCTGGACCGCGTTGCGTCCAAAGGCGAAGTGGTAAGCCATATTGCATCTGATAACGTGCTGGGCGGCAAGATTGCGGGCGATTACATCGCGAAGAAAGCGGGTGAAGGCGCGAAAGTTATCGAACTGCAGGGTATTGCCGGTACTTCAGCGGCGCGTGAGCGTGGCGAAGGTTTCCAGCAGGCTGTTGCGGCACACAAATTTAACGTACTGGCCAGCCAGCCGGCCGACTTCGACCGCACCAAAGGTCTGAACGTCATGCAGAACCTGCTTACCGCGCATCCTGACGTGCAGGCCGTATTTGCCCAGAACGATGAAATGGCGTTGGGTGCGCTGCGCGCACTGCAAACTGCGGGTAAATCTGATGTGATGGTGGTTGGATTTGACGGTACTCCAGATGGCGAAAAAGCAGTAAATGATGGCAAACTGGCTGCGACCATTGCTCAACTGCCGGATCAGATCGGCGCGAAAGGCGTTGAGACTGCGGATAAAGTACTGAAAGGCGAGAAGGTTCAGGCTAAATATCCGGTTGACCTGAAGCTGGTCATCAAGCAGTAA
PROTEIN sequence
Length: 297
MNMKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVILDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQAKIPVITLDRVASKGEVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDGTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVIKQ*