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NECEvent2014_3_3_scaffold_347

Alias: 173_001_scaffold_347

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_347_1
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1214)
DNA (1212bp) protein (404aa)
Integrase-related protein n=2 Tax=Clostridium kluyveri RepID=A5N1F6_CLOK5 rbh
Integrase {ECO:0000313|EMBL:KEZ88517.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
integrase-like protein
NECEvent2014_3_3_scaffold_347_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1236..1718)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9E586_CLOK1
MerR family transcriptional regulator {ECO:0000313|EMBL:CEO36543.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium
transcriptional regulator
NECEvent2014_3_3_scaffold_347_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1846..2064
DNA (219bp) protein (73aa)
Predicted transcriptional regulators n=2 Tax=Clostridiales RepID=D4M096_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL27456.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-1
NECEvent2014_3_3_scaffold_347_4
unknown

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2320..2550
DNA (231bp) protein (77aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_347_5
unknown

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2564..2782
DNA (219bp) protein (73aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_347_6
Anoxybacillus sp. BCO1, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2779..3522
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002D6469C
Bacteriophage replication protein O {ECO:0000313|EMBL:KHF30139.1}; TaxID=1548750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus sp. BCO1.;"
phage replication protein O, N-terminal domain protein
NECEvent2014_3_3_scaffold_347_7
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3519..4823
DNA (1305bp) protein (435aa)
DnaB domain protein helicase domain protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=U4Q8H1_TEPAE
DnaB domain-containing protein helicase domain-containing protein
DnaB domain protein helicase domain protein {ECO:0000313|EMBL:CDI40583.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;
NECEvent2014_3_3_scaffold_347_8
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4834..5466
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VWS4_THESW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK86969.1}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerob
NECEvent2014_3_3_scaffold_347_9
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5529..6437
DNA (909bp) protein (303aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:793 RepID=R5N773_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source
RpoD family RNA polymerase sigma factor
NECEvent2014_3_3_scaffold_347_10
unknown

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6451..6729
DNA (279bp) protein (93aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_347_11
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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6757..7362
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Streptococcus pyogenes GA40056 RepID=U9X8F4_STRPY
Sugar (Pentulose and hexulose) kinases {ECO:0000313|EMBL:GAM78920.1}; TaxID=1360 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis su
hypothetical protein
NECEvent2014_3_3_scaffold_347_12
Aerococcus viridans, Aerococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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7355..7828
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Aerococcus viridans ATCC 11563 RepID=D4YFZ8_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EFG49861.1}; TaxID=655812 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Aerococcus.;" source="Aerococcus viridans ATCC 11563.;"
NECEvent2014_3_3_scaffold_347_13
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(8033..9067)
DNA (1035bp) protein (345aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=706437 species="Bacteria; Firmicutes; B
L-lactate dehydrogenase n=5 Tax=Streptococcus intermedius RepID=I4DZZ3_STRIJ rbh
L-lactate dehydrogenase rbh
NECEvent2014_3_3_scaffold_347_14
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


9215..11662
DNA (2448bp) protein (816aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1161422 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Strepto
DNA gyrase subunit A n=1 Tax=Streptococcus anginosus SK1138 RepID=J5H1D1_STRAP rbh
DNA gyrase subunit A rbh
NECEvent2014_3_3_scaffold_347_15
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11683..12426
DNA (744bp) protein (248aa)
Sortase family protein n=3 Tax=Streptococcus anginosus RepID=E6J315_STRAP rbh
sortase
Sortase family protein {ECO:0000313|EMBL:EFU21632.1}; TaxID=706437 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="St
NECEvent2014_3_3_scaffold_347_16
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12630..13946)
DNA (1317bp) protein (439aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Streptococcus anginosus SK1138 RepID=J4TK64_STRAP rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EJP24719.1}; TaxID=1161422 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus angino
pyridine nucleotide-disulfide oxidoreductase
NECEvent2014_3_3_scaffold_347_17
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14297..14548
DNA (252bp) protein (84aa)
putative glutaryl-CoA dehydrogenase (EC:1.3.8.6)
Acyl-CoA dehydrogenase, C-terminal domain protein n=4 Tax=Streptococcus constellatus subsp. pharyngis RepID=F9P688_STRCV
Uncharacterized protein {ECO:0000313|EMBL:GAD36653.1}; TaxID=1000570 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="
Displaying 17 items

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