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NECEvent2014_3_3_scaffold_177_8

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: comp(11206..12591)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S8I0_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 461.0
  • Bit_score: 902
  • Evalue 1.60e-259
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium d similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 461.0
  • Bit_score: 901
  • Evalue 4.90e-259
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 461.0
  • Bit_score: 836
  • Evalue 3.00e-240

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
TTGGCCACTAAGGAAACGACGGCGAGCACTGAACAGGCTGATCTGACCGATAAGACCACCTCCACGAAGAAAGCCCCCTCGCGCAAGGCCTCCACCAAGAAAGCTGCGGACAAGAAGACCCCGGCCACGAAGACCCCGCGTAAGACTACCGCGAAGAAGAAAGCTCCCGCCAAGAGGCAGGAGGAGCCGATCGAGGACGAAGATACCCTTGATGGCGAAGAGGATCAGGTCGATGAGGCCGATCTCGACGATTTCGACGATGATCTCGACGACGTCGACGCGGAAGACGATGAGGCCGATCTCGACGAGGATGAGGAATCCGAGCCTGAAGATGACGAGGATGAGGACGACGAGGAACGCAAGAAGCCTGAGGAGCCCAAGGAAAAGGGCGCTTTCGTCGTGCGAGATGATGATGACGACGACAATCTGACTCCGTCCGGCAACCCGAAGCGTCGTGTAATCGCTGCCGGCGCCACCGCCGATCCGGTCAAGGACTACTTGAAGCAGATCGGACGCGTAAGCCTGCTGAATGCGGAACAGGAAGTCGACCTGTCCGAACGTATCGAAGCTGGCCTGTATGCCCAGCATCTGTTGGACACCGAGGCCAGTCAGATGGATTTCAAGCGTAGGCGTGAGCTCAAGTGGGCGGCGAATGACGGCAAGAAGGCCAAGGACCATCTGCTGGAGGCCAACCTTCGACTGGTGGTGTCGCTTGCCAAGCGTTACACCGGCCGTGGCATGTTGTTCCTCGATCTGATCCAGGAAGGCAACCTGGGCCTGATTCGTGCCGTCGAGAAGTTCGATTGGAAGAAGGGCTTCAAGTTCTCCACCTATGCGACGTGGTGGATCCGTCAGGCCATCACCCGAGCCATGGCCGATCAGGCCCGCACCATACGTGTGCCCGTGCATATGGTCGAGGTCATCAACAAGCTGTCCCGTGTGCAACGTCAGATGCTGCAGGATCTGGGTCGTGAGCCTACGCCGGATGAACTGGCGCGCGAGCTCGATATGCCTGTCGAGAAGGTGCAGGAAGTGCAGAAGTACGGGCGTGAGCCGATTTCGCTGCACACCCCGCTAGGTGAGGATGGCGATTCCGAGTTCGGCGATCTGATTGAGGATACCGACGCCATCGCACCGTCCGATGCGGTCGCCTTCTCGTTGCTGCAGGAGCAGTTCAAGCAGGTGCTCGAAACCCTGTCTCCGCGTGAAGCCGGCGTTATCAAGATGCGTTACGGCTTGGAAGACGGCCAGCCGAAGACATTGGATGATATCGGCCGTGTGTACGGCGTGACCCGTGAACGTATTCGCCAGATCGAGTCCAAGACCATGTCGAAGCTACGCCACCCGTCCCGTTCGCAGACGCTGCGCGACTTCCTGGATCAGTGA
PROTEIN sequence
Length: 462
LATKETTASTEQADLTDKTTSTKKAPSRKASTKKAADKKTPATKTPRKTTAKKKAPAKRQEEPIEDEDTLDGEEDQVDEADLDDFDDDLDDVDAEDDEADLDEDEESEPEDDEDEDDEERKKPEEPKEKGAFVVRDDDDDDNLTPSGNPKRRVIAAGATADPVKDYLKQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTEASQMDFKRRRELKWAANDGKKAKDHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIKMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ*