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NECEvent2014_3_3_scaffold_177_16

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: comp(22899..23555)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTI3_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 219.0
  • Bit_score: 416
  • Evalue 1.60e-113
  • rbh
Ribosomal subunit interface protein {ECO:0000313|EMBL:EFM41965.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium den similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 218.0
  • Bit_score: 435
  • Evalue 3.60e-119
30S ribosomal protein S30 similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 219.0
  • Bit_score: 416
  • Evalue 6.00e-114

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGGAAATCGTCGTTACCGGACGTCATACGCAGATCAAGCAAAGGTTCCGTGACGTTGTCGAAAGCAAGATGAATCGTGTGACCGCTATCGCTCCGGATGCGCAGCGCGTGCAGATCGTACTGTCGCATGAGGGCAATCCGCGTCAGGCCGACACCGCCAAGCGCGTGGAAATCACCGTCATCGCGGGCCGTACCGTAGTGCGTGCCGAAGCTTCCAGCGCCGACGAATTCAGCGCACTGGATATGGCTCTTGACAAGCTGACCCTGCGCCTGCGCCGCACCCGCGATCGCCGCAAGGATCATCGCCGTGGCTACACCAACCCGGTCCCGGTCGACATGGGCGTGGTTGAGCCGGAACCGACTGTGGAACCGGTCGAGGAACCGAACAACAGCCCGGCCGATGCCGTGGCTACGGATCTCGGCCCTGGTGAATCCGTTGAAGTCCAGGTTGGCGATACTCCCATCGTCATCCGTCGCAAGCTGCATGTCGCCGAGCCAATGACCATCGACGAGGCGCTGTACGAGATGGAACTGATCGGGCATGACTTCTTCCTGTTCGTAAACAAGGAGACAGGTCGTCCGTCCGTCGTCTATCATCGTCACGGCTGGAGCTACGGCGTCTTCGAGATCGATACTCCGGAGAATGTCAAGAAGTGA
PROTEIN sequence
Length: 219
MEIVVTGRHTQIKQRFRDVVESKMNRVTAIAPDAQRVQIVLSHEGNPRQADTAKRVEITVIAGRTVVRAEASSADEFSALDMALDKLTLRLRRTRDRRKDHRRGYTNPVPVDMGVVEPEPTVEPVEEPNNSPADAVATDLGPGESVEVQVGDTPIVIRRKLHVAEPMTIDEALYEMELIGHDFFLFVNKETGRPSVVYHRHGWSYGVFEIDTPENVKK*