ggKbase home page

NECEvent2014_3_3_scaffold_180_8

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: comp(8259..9833)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HA similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 524.0
  • Bit_score: 1037
  • Evalue 0.0
lysA; diaminopimelate decarboxylase (EC:4.1.1.17) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 524.0
  • Bit_score: 1035
  • Evalue 0.0
Diaminopimelate decarboxylase n=2 Tax=Bifidobacterium dentium RepID=D2Q6E3_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 524.0
  • Bit_score: 1035
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1575
ATGCCCATCACCCCGATTTGGCCGGCCGGGTCGGCCGTGAACGACAACGGTGAAATCACCTTCCACGGTCGCACCGCCGAAAGCCTGCTCGACGAATTCGGCTCGCCGCTCTACGTCATCGACACCGATGAAGTGCGTGCGCGCGCCTCGAAATTCGTAACATCCGCAGGCAATGCGTTCAACAACACCGTCACGCACGTAAGCTTCGCCGGCAAGGCATTGCTGTCCAAGGAGATCTGCCGCATCGTCACCGAAGCAGGCATGCTCATCGACACCTGCACCATGGGCGAGATGCGCATCGCGCTCGCCGCAGGCGTTCCGGGCCGTAGGCTCGTATTGCACGGCAACAACAAATCCGATGAGGAAATCGCGCTCGCCATCGAACAGGGATTCGCCAAAATCGTGGTGGACGAGCCGAACGAGCCCGCTCGCATCGCCGACATCGCCAAACGTCTTGGCAAGCGAGCACGGGTGATGCTGCGCGTCACCTCCGGCATCCATGCGGGCGGTCACGAATTCGTTTCGACCGCGCACGAGGATCAGAAATTCGGCGTGGCGTTGCTGCCGGTGGACGCCGACGCGAGCAAGCTGAGCGTGCTGGACGATCTGACCGACGTGACTCCGGCAGGAAGCAATGCAAGGCTGGGGGAGCAGTCGGGCGAGGCCGGTTCCGACCGTGCCCTGCGGTATGACATCAAGTACCCCTATGACATGAGCCACGAGAAGGTTTCGGAAGGCGATCGCAAACTTGCCGAAGCCATGACCATGGTGGCCGACGGACCGGCGCTCGCCGTGCTGAAGGATATCCAACGCCATCAGGACGTACTTGAACTGGTCGGCGTGCACTCGCATATCGGCTCCAACATCCATGATGCGGATGCCTTCATTCAGGCCGCGAAACGCATGATGCTCCTACGCAAGACCTTCTACGCCACCGATGCGTACACGTTGCCGGAGGTCGATCTGGGCGGCGGCTATTCCGTGGCCTACACCGATGGCGAGGATGCCATGGACATCGACGTGGAACTCGGCCGTCTCGCCGACGCGGTCACCACCGTGAACCGTGCGCTCGGCATGCCCGCCCCGGTCATCTCCTTCGAACCGGGTCGTTGGACGGTCGCGCCGACCGGCGTGACGCTCTACCGTGTAGGCACCGTCAAACCGGTGCGGCTGAATGGCGACGCCACCGACAAGGCCGGCAATCCGGTGCATGAACGTGTGTACGTATCCGTCGACGGCGGCATGAGCGACAACATCCGTCCCGCCCTGTACGGCTCCGACTACACCGCACGGCTTGCCAACCGTAAGGGTTCGGACGACACCAAACTGTGTCGTGTGGTGGGCATGCACTGCGAATCCGGCGACATCGTCGTGAACGAAGTGCGGCTGCCGGCCGACATCACGCGCGGCGACATTCTCGCGGTGCCGGTCACCGGCGCGTATGGGCGCACCATGGCCAGCAACTACAATCAGGCGTTGATTCCGGCGGTCGTCGGCATCGGCGAGACCGATGCGCATGTGATGATTCGCCGTCAGAGCATCGACGATCTCCTCAGCTGGGACGTCAGCCGGTAA
PROTEIN sequence
Length: 525
MPITPIWPAGSAVNDNGEITFHGRTAESLLDEFGSPLYVIDTDEVRARASKFVTSAGNAFNNTVTHVSFAGKALLSKEICRIVTEAGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVVDEPNEPARIADIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVALLPVDADASKLSVLDDLTDVTPAGSNARLGEQSGEAGSDRALRYDIKYPYDMSHEKVSEGDRKLAEAMTMVADGPALAVLKDIQRHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDAMDIDVELGRLADAVTTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVKPVRLNGDATDKAGNPVHERVYVSVDGGMSDNIRPALYGSDYTARLANRKGSDDTKLCRVVGMHCESGDIVVNEVRLPADITRGDILAVPVTGAYGRTMASNYNQALIPAVVGIGETDAHVMIRRQSIDDLLSWDVSR*