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NECEvent2014_3_3_scaffold_325_18

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: comp(13807..14346)

Top 3 Functional Annotations

Value Algorithm Source
Lysine decarboxylase n=2 Tax=Bifidobacterium dentium RepID=D2QAV2_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 179.0
  • Bit_score: 359
  • Evalue 2.50e-96
  • rbh
TIGR00730 family protein {ECO:0000313|EMBL:ETO96329.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 360
  • Evalue 1.60e-96
lysine decarboxylase similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 179.0
  • Bit_score: 359
  • Evalue 7.10e-97
  • rbh

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAACATTACGGTGTACCTGGGGGCACACGAAGGCAATGACCCTGCGTTCAAGGAAGCCGTCGTGGAACTGGCGACGTGGATATCCGAAAGCGGCAACAGGCTGGTTTACGGCGGTTCCGATGAGGGGCTGATGGGTGTGCTCGCCGATACGGTCATGGCGACCGGTGGCGAAGTGACCGGCATCGAGGCGCAGATGTTCGTGGACCGAGGCGTTGAACATAACGGTCTCACCGAATTGCATGTCGTATCGAATATCACGGAACGTCGCACCAAGATGATCGAACTTGGCGACGTGTTCATCGCCTTTCCCGGCGGCACCGGTACGCTTGAGGAGGTTAGCGAGGTCGTTTCGAAGATCTGCCTCAACCAACTGACCCAACCTTGCATCTTCTACAATCTCAATGGTTTCTATGACGATATGAAGTCGCTGCTCGATCGCATGATCACTGCAGGATTCTCCACTCCCGAACGTCAGCGCGGCATCTATTTCGCCGATGATCTCAAGGAAATCCGGCGCATCATCGAGGAGCGTCCATAA
PROTEIN sequence
Length: 180
MNITVYLGAHEGNDPAFKEAVVELATWISESGNRLVYGGSDEGLMGVLADTVMATGGEVTGIEAQMFVDRGVEHNGLTELHVVSNITERRTKMIELGDVFIAFPGGTGTLEEVSEVVSKICLNQLTQPCIFYNLNGFYDDMKSLLDRMITAGFSTPERQRGIYFADDLKEIRRIIEERP*