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NECEvent2014_3_3_scaffold_1264_2

Organism: NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: comp(181..852)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory family protein n=4 Tax=Clostridium difficile RepID=T2V1F8_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 219.0
  • Bit_score: 187
  • Evalue 1.30e-44
regulator similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 220.0
  • Bit_score: 186
  • Evalue 7.90e-45
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:CEO89231.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Famil similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 218.0
  • Bit_score: 186
  • Evalue 3.00e-44

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Taxonomy

Syntrophaceticus schinkii → Syntrophaceticus → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
ATGGAAAAATCTAAAATTTTAGTGTTAGAAGACAATAAAATAATAAGAGAAGGAATTAAGGAGTATTTGGAAGAAAATAATTATATAGTCGAGGAAGTTACTACAATCGAAGAATTTTATAATAAATTTATTGATGATATAGATATATTTTTATTAGACATTAATCTTCCAGATGGAAATGCCTTTAATATTGCCCCTAAAATAAAAAAATTGAAAAAACCTATAATTTTTCTTACTGTTAGAGATGAAGAAGAAGATATAATAAATGGTCTAAAAATTGGAGGAGATGACTATATTACAAAACCTTTTAAACTAAGTATTTTAAAGGCGAGAATAGAAACTGTTTTAAGAAGATATAAAAATGAAAATGGTAGATTTATTTATTATGATAAAATGGTTTTAGATATTGAAGGAACAGCACTCTACATAGACGGTAACGAAGTAGAATTAAGACCTAAGGAATATTTATTATTAGAAACTTTCATGAAGAATATAGAAAAAACCTTGACCAGAGATTTTCTTATGGAAATTACTTGGGATAACTATGAAGAATTTGTTAATGACAATACTTTATCAGTCACTATTAAAAGATTAAGGGAAAAACTTGAAATCTACGGTAAAAATATTAAAACTATAAGAGGTTTAGGATACAAATTAGAGAGCTATAAATAG
PROTEIN sequence
Length: 224
MEKSKILVLEDNKIIREGIKEYLEENNYIVEEVTTIEEFYNKFIDDIDIFLLDINLPDGNAFNIAPKIKKLKKPIIFLTVRDEEEDIINGLKIGGDDYITKPFKLSILKARIETVLRRYKNENGRFIYYDKMVLDIEGTALYIDGNEVELRPKEYLLLETFMKNIEKTLTRDFLMEITWDNYEEFVNDNTLSVTIKRLREKLEIYGKNIKTIRGLGYKLESYK*