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NECEvent2014_3_3_scaffold_1693_4

Organism: NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: comp(3042..3161)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5V5_CLOSW similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 38.0
  • Bit_score: 66
  • Evalue 9.80e-09
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 39.0
  • Bit_score: 68
  • Evalue 5.50e-10
Response regulator receiver {ECO:0000313|EMBL:AKA67195.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 39.0
  • Bit_score: 68
  • Evalue 2.70e-09

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Taxonomy

Clostridium scatologenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 120
GATAATACACTTTCTGTCTATATCCGTAGGCTACGCTGTAAAATTGAGAAGGATCCAAACTATCCTAAAATGATTCTCACTGTACGAGGTATTGGCTATAAATGGAATGTAGTCAGATAA
PROTEIN sequence
Length: 40
DNTLSVYIRRLRCKIEKDPNYPKMILTVRGIGYKWNVVR*