Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
DNA-directed RNA polymerase, beta' subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0B7_HALOH (db=UNIREF evalue=0.0 bit_score=1203.0 identity=51.77 coverage=94.3979933110368) | similarity |
UNIREF
DB: UNIREF |
51.77 | 94.4 | 1203 | 0.0 | twi:Thewi_2262 |
DNA-directed RNA polymerase subunit beta' | rbh |
KEGG
DB: KEGG |
49.4 | 999.99 | 1145 | 0.0 | twi:Thewi_2262 |
DNA-directed RNA polymerase subunit beta' | similarity |
KEGG
DB: KEGG |
49.4 | 999.99 | 1145 | 0.0 | twi:Thewi_2262 |
seg (db=Seg db_id=seg from=1119 to=1128) | iprscan |
interpro
DB: Seg |
null | null | null | null | twi:Thewi_2262 |
seg (db=Seg db_id=seg from=159 to=170) | iprscan |
interpro
DB: Seg |
null | null | null | null | twi:Thewi_2262 |
seg (db=Seg db_id=seg from=306 to=324) | iprscan |
interpro
DB: Seg |
null | null | null | null | twi:Thewi_2262 |
coiled-coil (db=Coil db_id=coil from=141 to=172 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | twi:Thewi_2262 |
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=7 to=1191 evalue=0.0) | iprscan |
interpro
DB: superfamily |
null | null | null | 0.0 | twi:Thewi_2262 |
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=12 to=1193 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 0.0 | twi:Thewi_2262 |
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=7 to=1195 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | twi:Thewi_2262 |
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=7 to=1195 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | twi:Thewi_2262 |
no description (db=HMMSmart db_id=SM00663 from=276 to=559 evalue=4.1e-154 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.10e-154 | twi:Thewi_2262 |
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=6 to=390 evalue=9.6e-109 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 9.60e-109 | twi:Thewi_2262 |
RNA_pol_Rpb1_1 (db=HMMPfam db_id=PF04997 from=9 to=387 evalue=2.6e-88 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.60e-88 | twi:Thewi_2262 |
RNA_pol_Rpb1_5 (db=HMMPfam db_id=PF04998 from=781 to=1149 evalue=4.4e-64 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.40e-64 | twi:Thewi_2262 |
RNA_pol_Rpb1_2 (db=HMMPfam db_id=PF00623 from=389 to=530 evalue=3.1e-49 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.10e-49 | twi:Thewi_2262 |
no description (db=Gene3D db_id=G3DSA:2.40.40.30 from=391 to=533 evalue=1.4e-29 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.40e-29 | twi:Thewi_2262 |
RNA_pol_Rpb1_3 (db=HMMPfam db_id=PF04983 from=534 to=674 evalue=6.1e-20 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 6.10e-20 | twi:Thewi_2262 |
RNA_pol_Rpb1_4 (db=HMMPfam db_id=PF05000 from=706 to=766 evalue=2.2e-07 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.20e-07 | twi:Thewi_2262 |
RNApol_bact_RpoC (db=HAMAP db_id=MF_01322 from=8 to=1195 evalue=9.563 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 9.56e+00 | twi:Thewi_2262 |
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase |
UNIPROT
DB: UniProtKB |
100.0 | 999.99 | 2321 | 0.0 | K2FHY2_9BACT | |
hor:Hore_01100 DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] alias=ACD7_40.20984.80G0012,ACD7_40.20984.80_12,ACD7_C00030G00012 id=129927 tax=ACD7 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 2320 | 0.0 | twi:Thewi_2262 |