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ACD7_30

Alias: ACD7_40.20984.80

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD7_30_1

Not on your lists

2..118
DNA (117bp) protein (39aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKE21046.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_30_2

Not on your lists

436..2178
DNA (1743bp) protein (581aa)
Threonyl-tRNA synthetase n=2 Tax=Clostridium carboxidivorans P7 RepID=C6PW03_9CLOT (db=UNIREF evalue=3.0e-177 bit_score=625.0 identity=51.56 coverage=98.1067125645439)
thrS2; threonyl-tRNA synthetase
thrS2; threonyl-tRNA synthetase
thrS: threonyl-tRNA synthetase (db=HMMTigr db_id=TIGR00418 from=11 to=576 evalue=3.5e-267 interpro_id=IPR002320 interpro_description=Threonyl-tRNA synthetase, class IIa GO=Molecular Function: threonine-tRNA ligase activity (GO:0004829), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: threonyl-tRNA aminoacylation (GO:0006435))
ACD7_30_3

Not on your lists

comp(2395..2748)
DNA (354bp) protein (118aa)
Predicted protein n=5 Tax=Bacteroides RepID=C3Q370_9BACE (db=UNIREF evalue=4.0e-30 bit_score=133.0 identity=54.31 coverage=95.7627118644068)
Uncharacterized protein {ECO:0000313|EMBL:EKE21048.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD7_30_4

Not on your lists

comp(2934..4661)
DNA (1728bp) protein (576aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=429 to=448)
transmembrane_regions (db=TMHMM db_id=tmhmm from=402 to=424)
transmembrane_regions (db=TMHMM db_id=tmhmm from=303 to=320)
ACD7_30_5

Not on your lists

comp(4835..5770)
DNA (936bp) protein (312aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Desulfotalea psychrophila RepID=PUR7_DESPS (db=UNIREF evalue=1.0e-117 bit_score=426.0 identity=69.97 coverage=91.6666666666667)
phosphoribosylamidoimidazole-succinocarboxamide synthase
phosphoribosylamidoimidazole-succinocarboxamide synthase
PURINE BIOSYNTHESIS PROTEIN 6/7, PUR6/7 (db=HMMPanther db_id=PTHR11609 from=37 to=306 evalue=3.6e-106 interpro_id=IPR001636 interpro_description=SAICAR synthetase GO=Molecular Function: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (GO:0004639), Biological Process: purine nucleotide biosynthetic process (GO:0006164))
ACD7_30_6

Not on your lists

comp(5786..6304)
DNA (519bp) protein (173aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (db=KEGG evalue=5.0e-08 bit_score=60.5 identity=29.94 coverage=78.0346820809249)
AIRC (db=HMMPfam db_id=PF00731 from=1 to=145 evalue=8.6e-11 interpro_id=IPR000031 interpro_description=1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase GO=Molecular Function: phosphoribosylaminoimidazole carboxylase activity (GO:0004638), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) (db=superfamily db_id=SSF52255 from=1 to=159 evalue=2.1e-08 interpro_id=IPR000031 interpro_description=1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase GO=Molecular Function: phosphoribosylaminoimidazole carboxylase activity (GO:0004638), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
no description (db=Gene3D db_id=G3DSA:3.40.50.7700 from=1 to=158 evalue=1.6e-07 interpro_id=IPR000031 interpro_description=1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase GO=Molecular Function: phosphoribosylaminoimidazole carboxylase activity (GO:0004638), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
ACD7_30_7

Not on your lists

comp(6564..7466)
DNA (903bp) protein (301aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=262)
seg (db=Seg db_id=seg from=246 to=262)
coiled-coil (db=Coil db_id=coil from=167 to=195 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE21052.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_30_8

Not on your lists

comp(7937..8494)
DNA (558bp) protein (186aa)
elongation factor P
Elongation factor P n=1 Tax=Bacillus coagulans 36D1 RepID=C1PEN3_BACCO (db=UNIREF evalue=2.0e-43 bit_score=178.0 identity=46.49 coverage=98.9247311827957)
efp: translation elongation factor P (db=HMMTigr db_id=TIGR00038 from=2 to=185 evalue=4.5e-88 interpro_id=IPR011768 interpro_description=Translation elongation factor P GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: cytoplasm (GO:0005737), Biological Process: translational elongation (GO:0006414))
Translation elongation factor P (db=HMMPIR db_id=PIRSF005901 from=1 to=185 evalue=6.3e-54 interpro_id=IPR020599 interpro_description=Translation elongation factor P/YeiP)
ACD7_30_9

Not on your lists


comp(8604..8813)
DNA (210bp) protein (70aa)
30S ribosomal protein S18
30S ribosomal protein S18 n=2 Tax=Granulicatella RepID=C8NI08_9LACT (db=UNIREF evalue=2.0e-14 bit_score=81.3 identity=58.06 coverage=87.1428571428571)
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479:SF16 from=3 to=69 evalue=6.2e-24)
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479 from=3 to=69 evalue=6.2e-24 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD7_30_10

Not on your lists

comp(9123..9641)
DNA (519bp) protein (173aa)
ssb; single-stranded binding protein (SSB; helix-destabilizing protein)
Single-stranded DNA-binding protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DRP8_EIKCO (db=UNIREF evalue=3.0e-31 bit_score=137.0 identity=52.42 coverage=67.6300578034682)
seg (db=Seg db_id=seg from=136 to=149)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=172 evalue=1.1e-47 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ACD7_30_11

Not on your lists


comp(9705..10364)
DNA (660bp) protein (220aa)
seg (db=Seg db_id=seg from=174 to=204)
no description (db=Gene3D db_id=G3DSA:3.30.70.60 from=1 to=104 evalue=8.3e-12 interpro_id=IPR014717 interpro_description=Translation elongation factor EF1B/ribosomal protein S6)
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=104 evalue=9.0e-12 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=2 to=101 evalue=1.8e-11 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD7_30_12

Not on your lists

comp(10569..14156)
DNA (3588bp) protein (1196aa)
DNA-directed RNA polymerase, beta' subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0B7_HALOH (db=UNIREF evalue=0.0 bit_score=1203.0 identity=51.77 coverage=94.3979933110368)
DNA-directed RNA polymerase subunit beta'
DNA-directed RNA polymerase subunit beta'
seg (db=Seg db_id=seg from=1119 to=1128)
ACD7_30_13

Not on your lists

comp(14251..17682)
DNA (3432bp) protein (1144aa)
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2J8_SPHTD (db=UNIREF evalue=0.0 bit_score=1237.0 identity=54.88 coverage=94.5804195804196)
DNA-directed RNA polymerase subunit beta
DNA-directed RNA polymerase subunit beta
seg (db=Seg db_id=seg from=32 to=49)
ACD7_30_14

Not on your lists

comp(17847..18149)
DNA (303bp) protein (101aa)
seg (db=Seg db_id=seg from=83 to=94)
GlcG-like (db=superfamily db_id=SSF143744 from=1 to=71 evalue=4.7e-07)
DUF336 (db=HMMPfam db_id=PF03928 from=10 to=67 evalue=3.6e-05 interpro_id=IPR005624 interpro_description=Protein of unknown function DUF336)
Uncharacterized protein {ECO:0000313|EMBL:EKE21059.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_30_15

Not on your lists

comp(18447..18872)
DNA (426bp) protein (142aa)
coiled-coil (db=Coil db_id=coil from=65 to=86 evalue=NA)
seg (db=Seg db_id=seg from=10 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
Uncharacterized protein {ECO:0000313|EMBL:EKE21060.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_30_16

Not on your lists

18880..19167
DNA (288bp) protein (96aa)
seg (db=Seg db_id=seg from=79 to=91)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=91)
Uncharacterized protein {ECO:0000313|EMBL:EKE21061.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_30_17

Not on your lists

19221..19859
DNA (639bp) protein (213aa)
Bipartite prolipoprotein diacylglyceryl transferase and phosphatase domain
seg (db=Seg db_id=seg from=202 to=212)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=206 evalue=1.1e-36)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=2 to=212 evalue=9.8e-24)
ACD7_30_18

Not on your lists

comp(19901..20674)
DNA (774bp) protein (258aa)
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPZ5_9BACL (db=UNIREF evalue=4.0e-13 bit_score=79.0 identity=24.66 coverage=81.0077519379845)
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=6 to=229 evalue=8.0e-19 interpro_id=IPR011009 interpro_description=Protein kinase-like domain)
APH (db=HMMPfam db_id=PF01636 from=7 to=210 evalue=5.3e-18 interpro_id=IPR002575 interpro_description=Aminoglycoside phosphotransferase)
ACD7_30_19

Not on your lists

comp(20819..21046)
DNA (228bp) protein (76aa)
seg (db=Seg db_id=seg from=61 to=73)
Uncharacterized protein {ECO:0000313|EMBL:EKE21064.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 19 items

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