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NECEvent2014_6_7_UNK

In projects: NECEvent2014_6_7
Displaying items 151-200 of 283 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_6_7_scaffold_1793 176_007_scaffold_1793
Order: Enterobacteriales (100%)
7 4628 bp 44.40 14.36 89.26
NECEvent2014_6_7_scaffold_1630 176_007_scaffold_1630
Order: Enterobacteriales (100%)
5 5179 bp 41.92 14.28 75.13
NECEvent2014_6_7_scaffold_5242 176_007_scaffold_5242
Species: Clostridium sporogenes (100%)
1 1302 bp 25.50 14.17 17.05
NECEvent2014_6_7_scaffold_3939 176_007_scaffold_3939
Species: Salmonella enterica (100%)
4 1812 bp 53.37 13.99 85.76
NECEvent2014_6_7_scaffold_1461 176_007_scaffold_1461
Species: Salmonella enterica (77.78%)
9 5827 bp 57.71 13.90 99.57
NECEvent2014_6_7_scaffold_5310 176_007_scaffold_5310
Species: Clostridium botulinum (100%)
1 1284 bp 29.91 13.79 78.97
NECEvent2014_6_7_scaffold_1054 176_007_scaffold_1054
Order: Enterobacteriales (85.71%)
7 8683 bp 53.98 13.30 97.40
NECEvent2014_6_7_scaffold_4340 176_007_scaffold_4340
Species: Salmonella enterica (100%)
1 1627 bp 52.80 13.09 99.75
NECEvent2014_6_7_scaffold_1841 176_007_scaffold_1841
Class: Gammaproteobacteria (60%)
5 4487 bp 51.91 12.90 62.85
NECEvent2014_6_7_scaffold_3025 176_007_scaffold_3025
Species: Citrobacter freundii (100%)
2 2444 bp 48.90 12.77 78.07
NECEvent2014_6_7_scaffold_2690 176_007_scaffold_2690
Species: Citrobacter freundii (100%)
2 2815 bp 42.02 12.63 73.11
NECEvent2014_6_7_scaffold_4234 176_007_scaffold_4234
Species: Salmonella enterica (66.67%)
3 1671 bp 50.15 12.57 96.59
NECEvent2014_6_7_scaffold_1260 176_007_scaffold_1260
Species: Citrobacter freundii (83.33%)
6 6998 bp 44.40 12.56 75.88
NECEvent2014_6_7_scaffold_2213 176_007_scaffold_2213
Species: Citrobacter freundii (60%)
5 3574 bp 51.23 12.51 75.63
NECEvent2014_6_7_scaffold_4090 176_007_scaffold_4090
Species: Salmonella enterica (75%)
4 1740 bp 46.78 12.50 88.62
NECEvent2014_6_7_scaffold_3084 176_007_scaffold_3084
Species: Escherichia coli (50%)
2 2394 bp 62.03 12.47 86.09
NECEvent2014_6_7_scaffold_607 176_007_scaffold_607
Genus: Enterobacter (60%)
25 18923 bp 51.97 12.40 86.69
NECEvent2014_6_7_scaffold_4361 176_007_scaffold_4361
Order: Enterobacteriales (100%)
3 1616 bp 58.85 12.16 100.99
NECEvent2014_6_7_scaffold_4477 176_007_scaffold_4477
Species: Escherichia coli (100%)
2 1566 bp 54.09 12.16 81.42
NECEvent2014_6_7_scaffold_5998 176_007_scaffold_5998
Species: Serratia odorifera (50%)
2 1115 bp 46.28 11.84 95.52
NECEvent2014_6_7_scaffold_863 176_007_scaffold_863
Genus: Enterobacter (58.33%)
12 11287 bp 53.11 11.83 96.14
NECEvent2014_6_7_scaffold_4276 176_007_scaffold_4276
Species: Escherichia coli (66.67%)
3 1652 bp 47.46 11.71 88.08
NECEvent2014_6_7_scaffold_3110 176_007_scaffold_3110
Species: Escherichia coli (60%)
5 2375 bp 51.16 11.68 91.71
NECEvent2014_6_7_scaffold_4434 176_007_scaffold_4434
Species: Citrobacter freundii (100%)
1 1585 bp 44.16 11.64 77.60
NECEvent2014_6_7_scaffold_3449 176_007_scaffold_3449
Order: Enterobacteriales (80%)
5 2122 bp 44.49 11.45 92.60
NECEvent2014_6_7_scaffold_5087 176_007_scaffold_5087
Genus: Dickeya (66.67%)
3 1349 bp 49.52 11.34 58.04
NECEvent2014_6_7_scaffold_2651 176_007_scaffold_2651
Species: Actinomyces sp. S4-C9 (75%)
4 2871 bp 52.56 11.08 61.65
NECEvent2014_6_7_scaffold_4716 176_007_scaffold_4716
Species: Cronobacter condimenti (100%)
1 1477 bp 47.53 11.07 28.84
NECEvent2014_6_7_scaffold_1361 176_007_scaffold_1361
Species: Citrobacter freundii (54.55%)
11 6355 bp 51.30 11.02 76.33
NECEvent2014_6_7_scaffold_1535 176_007_scaffold_1535
Order: Enterobacteriales (57.14%)
7 5521 bp 35.39 10.98 98.68
NECEvent2014_6_7_scaffold_5580 176_007_scaffold_5580
Species: Enterobacter cloacae (100%)
1 1212 bp 52.48 10.77 16.34
NECEvent2014_6_7_scaffold_5857 176_007_scaffold_5857
Species: Enterobacter asburiae (50%)
2 1143 bp 55.12 10.63 77.95
NECEvent2014_6_7_scaffold_5539 176_007_scaffold_5539
Species: Escherichia sp. KTE52 (50%)
2 1221 bp 52.01 10.57 86.00
NECEvent2014_6_7_scaffold_1732 176_007_scaffold_1732
Order: Enterobacteriales (75%)
8 4804 bp 48.29 10.43 66.94
NECEvent2014_6_7_scaffold_1914 176_007_scaffold_1914
Order: Enterobacteriales (100%)
6 4261 bp 54.02 10.42 96.03
NECEvent2014_6_7_scaffold_4397 176_007_scaffold_4397
Species: Enterobacter cloacae (100%)
2 1599 bp 53.66 10.41 99.06
NECEvent2014_6_7_scaffold_1794 176_007_scaffold_1794
Genus: Pseudomonas (50%)
6 4626 bp 61.09 10.41 92.41
NECEvent2014_6_7_scaffold_2257 176_007_scaffold_2257
Order: Enterobacteriales (60%)
5 3486 bp 42.43 10.24 92.60
NECEvent2014_6_7_scaffold_5361 176_007_scaffold_5361
Species: Salmonella enterica (66.67%)
3 1271 bp 55.94 10.15 101.97
NECEvent2014_6_7_scaffold_5364 176_007_scaffold_5364
Order: Enterobacteriales (66.67%)
3 1270 bp 57.64 10.04 99.69
NECEvent2014_6_7_scaffold_4932 176_007_scaffold_4932
Order: Enterobacteriales (100%)
3 1409 bp 56.07 9.79 82.19
NECEvent2014_6_7_scaffold_1820 176_007_scaffold_1820
Order: Enterobacteriales (75%)
4 4549 bp 50.87 9.76 94.70
NECEvent2014_6_7_scaffold_2888 176_007_scaffold_2888
Species: Pectobacterium wasabiae (100%)
2 2578 bp 46.59 9.72 73.43
NECEvent2014_6_7_scaffold_1166 176_007_scaffold_1166
Order: Enterobacteriales (90%)
10 7722 bp 49.21 9.67 79.10
NECEvent2014_6_7_scaffold_3965 176_007_scaffold_3965
Order: Enterobacteriales (75%)
4 1797 bp 46.80 9.60 81.30
NECEvent2014_6_7_scaffold_2506 176_007_scaffold_2506
Species: Enterobacter cloacae (66.67%)
3 3065 bp 41.04 9.54 65.58
NECEvent2014_6_7_scaffold_2470 176_007_scaffold_2470
Species: Escherichia coli (66.67%)
3 3120 bp 61.28 9.52 97.88
NECEvent2014_6_7_scaffold_4057 176_007_scaffold_4057
Order: Enterobacteriales (100%)
6 1754 bp 58.89 9.49 99.89
NECEvent2014_6_7_scaffold_5221 176_007_scaffold_5221
Species: Escherichia coli (50%)
2 1309 bp 58.21 9.28 94.88
NECEvent2014_6_7_scaffold_5651 176_007_scaffold_5651 3 1198 bp 30.13 9.27 61.85
Displaying items 151-200 of 283 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.