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NECEvent2014_6_7_UNK

In projects: NECEvent2014_6_7
Displaying items 201-250 of 283 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_6_7_scaffold_3577 176_007_scaffold_3577
Order: Enterobacteriales (75%)
4 2045 bp 49.98 9.17 89.19
NECEvent2014_6_7_scaffold_6517 176_007_scaffold_6517
Species: [Ruminococcus] torques (100%)
1 1010 bp 45.25 8.91 99.80
NECEvent2014_6_7_scaffold_6416 176_007_scaffold_6416
Species: Enterobacter sp. YD4 (100%)
1 1027 bp 54.14 8.62 99.90
NECEvent2014_6_7_scaffold_2679 176_007_scaffold_2679
Genus: Enterobacter (80%)
5 2835 bp 48.75 8.36 76.40
NECEvent2014_6_7_scaffold_5101 176_007_scaffold_5101
Species: Coprobacillus sp. 29_1 (50%)
2 1344 bp 41.89 8.26 52.90
NECEvent2014_6_7_scaffold_4885 176_007_scaffold_4885
Species: Enterobacter asburiae (50%)
4 1424 bp 52.81 8.11 95.44
NECEvent2014_6_7_scaffold_2053 176_007_scaffold_2053
Order: Enterobacteriales (100%)
6 3931 bp 48.46 7.90 76.39
NECEvent2014_6_7_scaffold_5702 176_007_scaffold_5702
Species: Tannerella sp. oral taxon BU063 (50%)
2 1184 bp 45.52 7.85 88.68
NECEvent2014_6_7_scaffold_5818 176_007_scaffold_5818
Species: Clostridium sporogenes (50%)
4 1153 bp 30.96 7.81 92.63
NECEvent2014_6_7_scaffold_4045 176_007_scaffold_4045
Species: Clostridium sporogenes (50%)
2 1760 bp 31.76 7.76 87.61
NECEvent2014_6_7_scaffold_4972 176_007_scaffold_4972
Species: Enterobacter sp. MGH 24 (50%)
2 1393 bp 58.15 7.75 97.56
NECEvent2014_6_7_scaffold_2749 176_007_scaffold_2749
Species: Coprobacillus sp. 29_1 (60%)
5 2742 bp 41.43 7.60 94.09
NECEvent2014_6_7_scaffold_5615 176_007_scaffold_5615
Species: Pseudomonas xanthomarina (100%)
1 1206 bp 65.26 7.59 99.75
NECEvent2014_6_7_scaffold_2843 176_007_scaffold_2843
Order: Enterobacteriales (50%)
4 2622 bp 38.94 7.44 80.66
NECEvent2014_6_7_scaffold_1747 176_007_scaffold_1747
Order: Erysipelotrichales (57.14%)
7 4737 bp 39.29 7.06 92.21
NECEvent2014_6_7_scaffold_4298 176_007_scaffold_4298
Order: Clostridiales (66.67%)
3 1645 bp 51.91 6.93 98.48
NECEvent2014_6_7_scaffold_6557 176_007_scaffold_6557
Species: Enterobacter asburiae (100%)
2 1002 bp 61.58 6.89 94.61
NECEvent2014_6_7_scaffold_6435 176_007_scaffold_6435
Order: Lactobacillales (66.67%)
3 1024 bp 29.69 6.88 63.87
NECEvent2014_6_7_scaffold_3717 176_007_scaffold_3717
Species: Clostridium sporogenes (100%)
1 1947 bp 35.13 6.78 100.00
NECEvent2014_6_7_scaffold_2746 176_007_scaffold_2746
Species: Escherichia coli (50%)
4 2744 bp 37.97 6.78 87.90
NECEvent2014_6_7_scaffold_2411 176_007_scaffold_2411
Order: Enterobacteriales (66.67%)
3 3208 bp 39.18 6.73 85.38
NECEvent2014_6_7_scaffold_6351 176_007_scaffold_6351
Species: RBG_13_Deltaproteobacteria_65_10_curated (50%)
2 1042 bp 29.37 6.62 98.18
NECEvent2014_6_7_scaffold_6061 176_007_scaffold_6061
Order: Enterobacteriales (66.67%)
3 1099 bp 52.23 6.41 70.97
NECEvent2014_6_7_scaffold_5384 176_007_scaffold_5384
Species: Halomonas sp. R57-5 (100%)
2 1266 bp 41.39 6.40 89.81
NECEvent2014_6_7_scaffold_6518 176_007_scaffold_6518
Species: Pseudomonas sp. UW4 (50%)
2 1010 bp 37.23 6.39 97.13
NECEvent2014_6_7_scaffold_3756 176_007_scaffold_3756
Species: Klebsiella sp. OBRC7 (50%)
2 1925 bp 56.68 6.39 99.12
NECEvent2014_6_7_scaffold_3954 176_007_scaffold_3954
Order: Enterobacteriales (100%)
3 1805 bp 49.53 6.32 72.30
NECEvent2014_6_7_scaffold_3379 176_007_scaffold_3379
Species: Escherichia coli (50%)
4 2165 bp 55.47 6.17 98.11
NECEvent2014_6_7_scaffold_5846 176_007_scaffold_5846
Genus: Citrobacter (66.67%)
3 1145 bp 55.20 6.16 81.22
NECEvent2014_6_7_scaffold_3020 176_007_scaffold_3020
Species: Escherichia coli (66.67%)
3 2448 bp 56.41 6.13 97.43
NECEvent2014_6_7_scaffold_5946 176_007_scaffold_5946
Species: Escherichia coli (50%)
2 1127 bp 49.87 6.12 72.67
NECEvent2014_6_7_scaffold_4556 176_007_scaffold_4556
Species: Peptoclostridium difficile (100%)
3 1535 bp 48.08 6.06 83.65
NECEvent2014_6_7_scaffold_5880 176_007_scaffold_5880
Species: Dickeya zeae (100%)
1 1139 bp 38.81 6.06 81.12
NECEvent2014_6_7_scaffold_6299 176_007_scaffold_6299
Species: [Clostridium] saccharolyticum (50%)
2 1052 bp 47.81 5.99 86.12
NECEvent2014_6_7_scaffold_5870 176_007_scaffold_5870
Species: Escherichia coli (50%)
2 1141 bp 34.71 5.92 69.94
NECEvent2014_6_7_scaffold_5773 176_007_scaffold_5773
Species: Escherichia sp. KTE52 (100%)
1 1168 bp 47.77 5.91 40.58
NECEvent2014_6_7_scaffold_2867 176_007_scaffold_2867
Species: Escherichia coli (50%)
4 2595 bp 37.80 5.78 93.64
NECEvent2014_6_7_scaffold_5234 176_007_scaffold_5234
Species: Alteromonas macleodii (100%)
1 1305 bp 33.49 5.75 99.77
NECEvent2014_6_7_scaffold_4333 176_007_scaffold_4333
Species: Enterobacter sp. R4-368 (50%)
2 1629 bp 50.28 5.71 61.69
NECEvent2014_6_7_scaffold_4863 176_007_scaffold_4863
Species: Kosakonia radicincitans (100%)
1 1430 bp 37.48 5.66 49.72
NECEvent2014_6_7_scaffold_4425 176_007_scaffold_4425
Species: RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated (50%)
2 1587 bp 36.55 5.48 97.92
NECEvent2014_6_7_scaffold_6021 176_007_scaffold_6021
Species: Veillonella sp. oral taxon 158 (100%)
1 1110 bp 57.84 5.41 99.73
NECEvent2014_6_7_scaffold_5514 176_007_scaffold_5514
Species: Salmonella enterica (100%)
1 1229 bp 30.19 5.37 52.24
NECEvent2014_6_7_scaffold_5933 176_007_scaffold_5933
Species: Escherichia coli (100%)
2 1129 bp 34.46 5.31 96.19
NECEvent2014_6_7_scaffold_5054 176_007_scaffold_5054
Species: Clostridium botulinum (75%)
4 1361 bp 29.17 5.29 74.28
NECEvent2014_6_7_scaffold_4893 176_007_scaffold_4893
Species: Yokenella regensburgei (50%)
2 1422 bp 37.41 5.27 46.41
NECEvent2014_6_7_scaffold_4281 176_007_scaffold_4281
Species: Salmonella enterica (50%)
2 1651 bp 40.16 5.27 89.40
NECEvent2014_6_7_scaffold_6015 176_007_scaffold_6015 1 1112 bp 37.32 5.26 46.40
NECEvent2014_6_7_scaffold_5628 176_007_scaffold_5628
Species: Pseudomonas fluorescens (50%)
2 1203 bp 38.07 5.24 83.29
NECEvent2014_6_7_scaffold_6056 176_007_scaffold_6056
Species: Clostridium sporogenes (100%)
2 1100 bp 33.00 5.18 80.18
Displaying items 201-250 of 283 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.