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NECEvent2014_3_4_scaffold_352

Alias: 173_002_scaffold_352

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_352_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

165..839
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9N0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36495.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptidoglycan-binding lysin domain protein
NECEvent2014_3_4_scaffold_352_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(906..2228)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9E7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36496.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
xanthine/uracil permease family protein
NECEvent2014_3_4_scaffold_352_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2448..2675)
DNA (228bp) protein (76aa)
Uroporphyrinogen decarboxylase n=2 Tax=Clostridium butyricum RepID=M8KE26_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91302.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_3_4_scaffold_352_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2751..3023)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJE1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36498.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_4_scaffold_352_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3144..6014)
DNA (2871bp) protein (957aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUR0_CLOBU rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
mutS; DNA mismatch repair protein MutS
NECEvent2014_3_4_scaffold_352_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6485..6859
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXI9_CLOBU
GTPases-Sulfate adenylate transferase subunit 1 {ECO:0000313|EMBL:KJZ86905.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
hypothetical protein
NECEvent2014_3_4_scaffold_352_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6986..7360)
DNA (375bp) protein (125aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
panD; aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=4 Tax=Clostridium butyricum RepID=B1QXI8_CLOBU
NECEvent2014_3_4_scaffold_352_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7415..8257)
DNA (843bp) protein (281aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
Pantothenate synthetase n=2 Tax=Clostridium butyricum RepID=M8KE21_CLOBU rbh
panC; pantoate--beta-alanine ligase
NECEvent2014_3_4_scaffold_352_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8345..9172)
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Clostridium butyricum RepID=M8JA51_CLOBU rbh
NECEvent2014_3_4_scaffold_352_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9172..10191)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AUR5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36504.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_352_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10370..11614)
DNA (1245bp) protein (415aa)
Efflux ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=M8JJ64_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36505.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC-type transport system, involved in lipoprotein release, permease component
NECEvent2014_3_4_scaffold_352_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11605..12339)
DNA (735bp) protein (245aa)
yknY1; ABC transporter ATP-binding protein YknY (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K5S8_CLOBU rbh
Cell division transporter, ATP-binding protein FtsE {ECO:0000313|EMBL:KJZ86892.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
NECEvent2014_3_4_scaffold_352_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12332..13774)
DNA (1443bp) protein (481aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KE15_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86882.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
multidrug resistance efflux pump
NECEvent2014_3_4_scaffold_352_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14052..14930)
DNA (879bp) protein (293aa)
Site-specific recombinase, phage integrase family n=2 Tax=Clostridium butyricum RepID=C4IG50_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86891.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
integrase/recombinase
NECEvent2014_3_4_scaffold_352_15
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15640..17280)
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUS0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ94436.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
sensory box histidine kinase
NECEvent2014_3_4_scaffold_352_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17702..19054)
DNA (1353bp) protein (451aa)
MATE efflux family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9P5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89346.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Na+-driven multidrug efflux pump
NECEvent2014_3_4_scaffold_352_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19901..20206)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K5S2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86898.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_4_scaffold_352_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20578..21225)
DNA (648bp) protein (216aa)
Nitrite/sulfite reductase 4Fe-4S family protein n=2 Tax=Clostridium butyricum RepID=M8KE11_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92079.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
nitrite reductase
NECEvent2014_3_4_scaffold_352_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21212..21613)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JA40_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36513.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying 19 items

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