ggKbase home page

NECEvent2014_3_4_scaffold_407

Alias: 173_002_scaffold_407

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_407_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(709..1485)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JC65_CLOBU rbh
Mobile element protein {ECO:0000313|EMBL:KJZ82852.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
transposase
NECEvent2014_3_4_scaffold_407_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1875..2060)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KG44_CLOBU
transposase
Mobile element protein {ECO:0000313|EMBL:KJZ85397.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_4_scaffold_407_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2162..2512)
DNA (351bp) protein (117aa)
IS66 Orf2 like protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7X3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30341.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_407_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2505..2816)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLB3_CLOBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJZ89453.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_3_4_scaffold_407_5
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3068..4849)
DNA (1782bp) protein (594aa)
Divergent AAA domain protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QTK8_9CYAN rbh
Divergent AAA domain protein {ECO:0000313|EMBL:ERT09766.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
hypothetical protein
NECEvent2014_3_4_scaffold_407_6
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4993..6108)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X3M0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KEI12535.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691
hypothetical protein
NECEvent2014_3_4_scaffold_407_7
unknown

Not on your lists

comp(6324..6455)
DNA (132bp) protein (44aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_407_8
unknown

Not on your lists

comp(6506..6706)
DNA (201bp) protein (67aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_407_9
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7066..8220)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSY6_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA08683.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobact
NECEvent2014_3_4_scaffold_407_10
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8224..9849)
DNA (1626bp) protein (542aa)
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:EIA08684.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EIA08684.1};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavo
Type I restriction-modification system, DNA-methyltransferase subunit M n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSY7_9FLAO
N-6 DNA methylase
NECEvent2014_3_4_scaffold_407_11
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9885..10340)
DNA (456bp) protein (152aa)
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:EIA08684.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EIA08684.1};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavo
Type I restriction-modification system, DNA-methyltransferase subunit M n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FSY7_9FLAO
NECEvent2014_3_4_scaffold_407_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11054..12484)
DNA (1431bp) protein (477aa)
Putative PAS/PAC sensor protein n=2 Tax=Clostridium butyricum RepID=B1QWW0_CLOBU rbh
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EEP53871.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 st
PAS/PAC sensor protein
NECEvent2014_3_4_scaffold_407_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12574..12858)
DNA (285bp) protein (95aa)
Anti-sigma factor antagonist n=2 Tax=Clostridium butyricum RepID=M8KBH7_CLOBU
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.
anti-sigma-factor antagonist
NECEvent2014_3_4_scaffold_407_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12870..14870)
DNA (2001bp) protein (667aa)
Methyl-accepting chemotaxis protein signaling domain n=3 Tax=Clostridium butyricum RepID=B1QWW2_CLOBU rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EEP53344.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
methyl-accepting chemotaxis sensory transducer
NECEvent2014_3_4_scaffold_407_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14948..15370)
DNA (423bp) protein (141aa)
UPI0003D59351 related cluster n=1 Tax=unknown RepID=UPI0003D59351
Anti-sigma F factor {ECO:0000313|EMBL:ETI91009.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ATP-binding region ATPase domain protein
NECEvent2014_3_4_scaffold_407_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15558..15797)
DNA (240bp) protein (80aa)
Glutamate synthase , homotetrameric n=4 Tax=Clostridium butyricum RepID=B1QWW4_CLOBU
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ENZ35694.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium buty
oxidoreductase
Displaying 16 items

View Taxonomy