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NECEvent2014_3_5_scaffold_128

Alias: 173_003_scaffold_128

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_128_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..705)
DNA (705bp) protein (235aa)
Flagellar motor switch protein FliG n=2 Tax=Clostridium butyricum RepID=M8JHA4_CLOBU rbh
Flagellar motor switch protein FliG {ECO:0000313|EMBL:KJZ87673.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
fliG; flagellar motor switch protein FliG
NECEvent2014_3_5_scaffold_128_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(711..2273)
DNA (1563bp) protein (521aa)
Flagellar M-ring protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J702_CLOBU rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fliF; flagellar MS-ring protein
NECEvent2014_3_5_scaffold_128_3
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2297..2605)
DNA (309bp) protein (103aa)
Flagellar hook-basal body complex protein FliE n=2 Tax=Clostridium butyricum RepID=M8KAS0_CLOBU
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
fliE; flagellar hook-basal body complex protein FliE
NECEvent2014_3_5_scaffold_128_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2620..3027)
DNA (408bp) protein (136aa)
Flagellar basal-body rod protein FlgC n=2 Tax=Clostridium butyricum RepID=M8K2L1_CLOBU
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
flgC; flagellar basal-body rod protein FlgC
NECEvent2014_3_5_scaffold_128_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3041..3490)
DNA (450bp) protein (150aa)
Flagellar basal body rod protein FlgB n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YV52_CLOBU
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
flgB; flagellar basal body rod protein FlgB
NECEvent2014_3_5_scaffold_128_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4138..4968)
DNA (831bp) protein (277aa)
Flagellin domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHA9_CLOBU rbh
Flagellin protein FlaA {ECO:0000313|EMBL:KJZ82718.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hag; flagellin
NECEvent2014_3_5_scaffold_128_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4994..5170)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J706_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ82746.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_3_5_scaffold_128_8
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6050..6913)
DNA (864bp) protein (288aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobact
Formyl transferase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JNT6_FUSVA
formyl transferase domain-containing protein
NECEvent2014_3_5_scaffold_128_9
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6931..7881)
DNA (951bp) protein (317aa)
hypothetical protein Tax=CG_Ignavi_01
hypothetical protein
NECEvent2014_3_5_scaffold_128_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7888..8928)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00031899B4 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJH01773.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium
hypothetical protein
NECEvent2014_3_5_scaffold_128_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8912..10024)
DNA (1113bp) protein (371aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX61_CLOSA rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87559.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_5_scaffold_128_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10017..10979)
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2J0_CLOB8 rbh
Integral membrane protein {ECO:0000313|EMBL:KJZ97617.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NAD-dependent epimerase/dehydratase
NECEvent2014_3_5_scaffold_128_13
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(11023..11961)
DNA (939bp) protein (313aa)
radical SAM domain-containing protein Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
radical SAM domain-containing protein
NECEvent2014_3_5_scaffold_128_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11988..14390)
DNA (2403bp) protein (801aa)
Glycosyl transferase family 2 n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5Q6_9CLOT rbh
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:KJZ87547.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
glycosyl transferase group 1
NECEvent2014_3_5_scaffold_128_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14423..16510)
DNA (2088bp) protein (696aa)
Glycosyl transferase family 2 n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTP0_ACEAZ rbh
Flagellar hook-associated protein FlgL {ECO:0000313|EMBL:KJZ97645.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
family 2 glycosyl transferase
NECEvent2014_3_5_scaffold_128_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16663..17475)
DNA (813bp) protein (271aa)
flagellin n=1 Tax=Clostridium botulinum RepID=UPI00030CA6F0 rbh
Flagellin protein FlaA {ECO:0000313|EMBL:KJZ87555.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
flagellin
NECEvent2014_3_5_scaffold_128_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17680..18744)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Geobacillus stearothermophilus RepID=Q6WNG9_GEOSE rbh
Beta 1,4 glucosyltransferase {ECO:0000313|EMBL:KJZ82724.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Glycosyl transferase, group 2 family protein
NECEvent2014_3_5_scaffold_128_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18818..19159)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YV57_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31476.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_128_19
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19188..20645)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y399_9CLOT rbh
Flagellar hookassociated protein FliD {ECO:0000313|EMBL:KJZ82778.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN
flagellar hook-associated 2 domain-containing protein
NECEvent2014_3_5_scaffold_128_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20678..21052)
DNA (375bp) protein (125aa)
Flagellar protein FliS n=2 Tax=Clostridium butyricum RepID=M8JHB4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97643.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
fliS; flagellar protein FliS
NECEvent2014_3_5_scaffold_128_21
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21066..21356)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8J711_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ82834.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_3_5_scaffold_128_22
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21395..21796)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KAS9_CLOBU
Flagellin {ECO:0000313|EMBL:KJZ82821.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
flagellar protein FlaG protein
NECEvent2014_3_5_scaffold_128_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21844..22062)
DNA (219bp) protein (73aa)
Carbon storage regulator homolog n=2 Tax=Clostridium butyricum RepID=M8K2M1_CLOBU
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN1
carbon storage regulator, CsrA
NECEvent2014_3_5_scaffold_128_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22064..22528)
DNA (465bp) protein (155aa)
Flagellar assembly factor FliW n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH63_CLOBU
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A
fliW; flagellar assembly factor FliW
NECEvent2014_3_5_scaffold_128_25
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22530..23861)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHB9_CLOBU rbh
Flagellar hookassociated protein FlgL {ECO:0000313|EMBL:KJZ82791.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN
flgL; flagellar hook-associated protein 3
NECEvent2014_3_5_scaffold_128_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23878..25701)
DNA (1824bp) protein (608aa)
Flagellar hook-associated protein FlgK n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFB2_CLOBU rbh
Beta 1,4 glucosyltransferase {ECO:0000313|EMBL:KJZ97624.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
flgK; flagellar hook-associated protein FlgK
NECEvent2014_3_5_scaffold_128_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25884..26294)
DNA (411bp) protein (137aa)
FlgN family protein n=2 Tax=Clostridium butyricum RepID=M8KAT2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97639.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
FlgN family protein
NECEvent2014_3_5_scaffold_128_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26304..26573)
DNA (270bp) protein (90aa)
Negative regulator of flagellin synthesis FlgM n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2M6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87593.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
anti-sigma-28 factor, FlgM
NECEvent2014_3_5_scaffold_128_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26866..28152)
DNA (1287bp) protein (429aa)
Flagellar motor switch protein FliN n=2 Tax=Clostridium butyricum RepID=R0A4S9_CLOBU rbh
Flagellar motor switch protein FliN {ECO:0000313|EMBL:ENZ31488.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 6
flagellar motor switch protein
NECEvent2014_3_5_scaffold_128_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28136..29134)
DNA (999bp) protein (333aa)
UPI0003D61ADD related cluster n=1 Tax=unknown RepID=UPI0003D61ADD rbh
Flagellar motor switch protein FliM {ECO:0000313|EMBL:KJZ87573.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
fliM; flagellar motor switch protein FliM
Displaying items 1-30 of 54 in total

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