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NECEvent2014_3_5_scaffold_237

Alias: 173_003_scaffold_237

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_237_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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166..1293
DNA (1128bp) protein (376aa)
Glycine betaine transport ATP-binding protein opuAA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMK6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87044.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
glycine betaine/L-proline ABC transporter ATP-binding protein
NECEvent2014_3_5_scaffold_237_2
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1293..2876
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATS4_CLOBU rbh
L-proline glycine betaine binding ABC transporter protein ProX / Osmotic adaptation {ECO:0000313|EMBL:KJZ88468.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
glycine betaine/L-proline ABC transporter permease/glycine betaine/L-proline-binding protein
NECEvent2014_3_5_scaffold_237_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3062..4822)
DNA (1761bp) protein (587aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-d-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDE0_CLOBU rbh
NECEvent2014_3_5_scaffold_237_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5272..5667
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QVW3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52699.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_3_5_scaffold_237_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5669..6004
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6W6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35450.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_237_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6085..7512
DNA (1428bp) protein (476aa)
bglA1; 6-phospho-beta-glucosidase BglA (EC:3.2.1.86)
6-phospho-beta-glucosidase BglA n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6E7_CLOBU rbh
6-phospho-beta-glucosidase BglA {ECO:0000313|EMBL:ENZ35451.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3
NECEvent2014_3_5_scaffold_237_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7853..9241
DNA (1389bp) protein (463aa)
PTS system mannitol-specific transporter subunit IIC (EC:2.7.1.69)
PTS system mannitol-specific EIICB component n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAW7_9CLOT rbh
EIICB-Mtl {ECO:0000313|EMBL:ERI79571.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
NECEvent2014_3_5_scaffold_237_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9324..11450
DNA (2127bp) protein (709aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
Putative licABCH operon regulator n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQW5_CLOSY rbh
PRD domain protein {ECO:0000313|EMBL:ERI79570.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
NECEvent2014_3_5_scaffold_237_9
unknown

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11475..11582
DNA (108bp) protein (36aa)

This feature has no annotations

NECEvent2014_3_5_scaffold_237_10
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11572..12033
DNA (462bp) protein (154aa)
Mannitol-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EEA84975.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEA84975.1};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiale
Mannitol-specific phosphotransferase enzyme IIA component n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZN1_9FIRM
phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
NECEvent2014_3_5_scaffold_237_11
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12039..12965
DNA (927bp) protein (309aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
Tagatose-6-phosphate kinase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZN2_9FIRM rbh
1-phosphofructokinase
NECEvent2014_3_5_scaffold_237_12
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13189..14451
DNA (1263bp) protein (421aa)
GroES-like protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZN3_9FIRM rbh
GroES-like protein {ECO:0000313|EMBL:EEA84977.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM
alcohol dehydrogenase
NECEvent2014_3_5_scaffold_237_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14453..16279
DNA (1827bp) protein (609aa)
glmS; glutamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKK4_CLOSA
NECEvent2014_3_5_scaffold_237_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16872..18206
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNV7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87052.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC-type sugar transport system, periplasmic component
NECEvent2014_3_5_scaffold_237_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18365..19315
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDE4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87054.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
sugar ABC transporter permease
NECEvent2014_3_5_scaffold_237_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19315..20142
DNA (828bp) protein (276aa)
Beta-glucanase {ECO:0000313|EMBL:KJZ87055.1}; EC=3.2.1.73 {ECO:0000313|EMBL:KJZ87055.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHD8_CLOBU rbh
sugar ABC transporter permease
NECEvent2014_3_5_scaffold_237_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20312..23452
DNA (3141bp) protein (1047aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K946_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87045.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_3_5_scaffold_237_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23470..24813
DNA (1344bp) protein (448aa)
srfJ; glucosylceramidase (EC:3.2.1.45)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JML4_CLOBU rbh
Osmotically activated L-carnitine ABC transporter, ATP binding protein, opuCA {ECO:0000313|EMBL:KJZ87051.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
NECEvent2014_3_5_scaffold_237_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25065..26078
DNA (1014bp) protein (338aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNW0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85136.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
LacI family transcriptional regulator
NECEvent2014_3_5_scaffold_237_20
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26101..28803
DNA (2703bp) protein (901aa)
Cellobiose phosphorylase-like protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDE9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88489.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
cellulase
NECEvent2014_3_5_scaffold_237_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28878..30578
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHE3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87050.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
methyl-accepting chemotaxis sensory transducer
NECEvent2014_3_5_scaffold_237_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30700..33327
DNA (2628bp) protein (876aa)
Glucan endo-1,3-beta-glucosidase A1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K950_CLOBU rbh
L-proline glycine betaine binding ABC transporter protein ProX / Osmotic adaptation {ECO:0000313|EMBL:KJZ87048.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
glycoside hydrolase family protein
NECEvent2014_3_5_scaffold_237_23
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33402..34136)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JML7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88449.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ApiAP2; transcription factor with AP2 domain(s), putative
NECEvent2014_3_5_scaffold_237_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34466..35203
DNA (738bp) protein (246aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNW5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89623.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
transcriptional regulator, RpiR family
NECEvent2014_3_5_scaffold_237_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35589..35753
DNA (165bp) protein (55aa)
PTS system, lactose/cellobiose family IIC subunit (EC:2.7.1.69)
Lichenan permease iic component n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDF3_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Displaying 25 items

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