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NECEvent2014_3_5_scaffold_354

Alias: 173_003_scaffold_354

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_354_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..390
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATI5_CLOBU
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:KJZ82883.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp
GNAT family acetyltransferase
NECEvent2014_3_5_scaffold_354_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(431..1132)
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8J3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36065.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_354_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1151..1615)
-----------------
DNA (465bp)
protein (155aa)
Response regulator receiver protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHL8_CLOBU rbh
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:ETI91408.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium but
response regulator receiver protein
NECEvent2014_3_5_scaffold_354_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1616..2881)
-----------------
DNA (1266bp)
protein (422aa)
Permease n=2 Tax=Clostridium butyricum RepID=B1QUD3_CLOBU rbh
Permease {ECO:0000313|EMBL:EEP53524.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
NECEvent2014_3_5_scaffold_354_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3183..4055
-----------------
DNA (873bp)
protein (291aa)
Polyferredoxin n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KCG9_CLOBU rbh
Polyferredoxin {ECO:0000313|EMBL:ETI91410.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
napH; polyferredoxin NapH
NECEvent2014_3_5_scaffold_354_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4093..4644
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATJ1_CLOBU rbh
Polyferredoxin {ECO:0000313|EMBL:KJZ82914.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
FMN-binding domain-containing protein
NECEvent2014_3_5_scaffold_354_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4677..5636
-----------------
DNA (960bp)
protein (320aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=2 Tax=Clostridium butyricum RepID=B1QUD0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83819.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ApbE family lipoprotein
NECEvent2014_3_5_scaffold_354_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5670..6365
-----------------
DNA (696bp)
protein (232aa)
Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=3 Tax=Clostridium butyricum RepID=B1QUC9_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ36071.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
Two-component response regulator
NECEvent2014_3_5_scaffold_354_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6367..7794
-----------------
DNA (1428bp)
protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AVJ8_CLOBU rbh
two-component system sensor histidine kinase
NECEvent2014_3_5_scaffold_354_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7954..8637)
-----------------
DNA (684bp)
protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AI98_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36073.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_354_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8831..9667
-----------------
DNA (837bp)
protein (279aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QUC6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82902.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_5_scaffold_354_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10019..10366
-----------------
DNA (348bp)
protein (116aa)
Nitrogen regulatory protein P-II n=4 Tax=Clostridium butyricum RepID=B1QUC5_CLOBU
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EEP54128.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
nitrogen regulatory protein P-II
NECEvent2014_3_5_scaffold_354_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10504..11574
-----------------
DNA (1071bp)
protein (357aa)
Spermidine/putrescine ABC transporter spermidine/putrescine-binding protein n=2 Tax=Clostridium butyricum RepID=B1QUC4_CLOBU rbh
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:EEP54873.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
extracellular solute-binding protein
NECEvent2014_3_5_scaffold_354_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11728..12858
-----------------
DNA (1131bp)
protein (377aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostri
Polyamine ABC transporter, ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AVK1_CLOBU rbh
spermidine/putrescine ABC transporter ATPase subunit
NECEvent2014_3_5_scaffold_354_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12872..13735
-----------------
DNA (864bp)
protein (288aa)
Putrescine transport system permease protein PotH n=2 Tax=Clostridium butyricum RepID=B1QUC2_CLOBU rbh
Spermidine/putrescine ABC transporter, permease protein PotB {ECO:0000313|EMBL:EEP53695.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
binding-protein-dependent transport systems inner membrane component
NECEvent2014_3_5_scaffold_354_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13736..14542
-----------------
DNA (807bp)
protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATK3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36079.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ornithine carbamoyltransferase
NECEvent2014_3_5_scaffold_354_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14559..15935
-----------------
DNA (1377bp)
protein (459aa)
N-acyl-D-aspartate/D-glutamate deacylase (EC:3.5.1.81)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8K5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36080.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_5_scaffold_354_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16043..17524
-----------------
DNA (1482bp)
protein (494aa)
Betaine aldehyde dehydrogenase {ECO:0000313|EMBL:KJZ82886.1}; EC=1.2.1.8 {ECO:0000313|EMBL:KJZ82886.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
Glyceraldehyde-3-phosphate dehydrogenase (NADP+) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHK5_CLOBU rbh
aldehyde dehydrogenase
NECEvent2014_3_5_scaffold_354_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17763..18602
-----------------
DNA (840bp)
protein (280aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=2 Tax=Clostridium butyricum RepID=M8K485_CLOBU rbh
NECEvent2014_3_5_scaffold_354_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18677..19429)
-----------------
DNA (753bp)
protein (251aa)
Transcriptional regulator, LuxR family protein n=2 Tax=Clostridium butyricum RepID=B1QUB7_CLOBU rbh
Regulatory protein, LuxR {ECO:0000313|EMBL:KJZ82866.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
regulatory protein, LuxR
NECEvent2014_3_5_scaffold_354_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19793..21148
-----------------
DNA (1356bp)
protein (452aa)
Putrescine aminotransferase {ECO:0000313|EMBL:KJZ82908.1}; EC=2.6.1.82 {ECO:0000313|EMBL:KJZ82908.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
patA; putrescine aminotransferase PatA (EC:2.6.1.82)
Putrescine aminotransferase n=2 Tax=Clostridium butyricum RepID=B1QUB6_CLOBU rbh
NECEvent2014_3_5_scaffold_354_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21339..22448
-----------------
DNA (1110bp)
protein (370aa)
NAD-dependent 4-hydroxybutyrate dehydrogenase (4HBD) {ECO:0000313|EMBL:EEP54988.1}; EC=1.1.1.61 {ECO:0000313|EMBL:EEP54988.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C
NAD-dependent 4-hydroxybutyrate dehydrogenase (EC:1.1.1.61)
NAD-dependent 4-hydroxybutyrate dehydrogenase n=2 Tax=Clostridium butyricum RepID=B1QUB5_CLOBU rbh
NECEvent2014_3_5_scaffold_354_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22471..23325
-----------------
DNA (855bp)
protein (285aa)
N-carbamoylputrescine amidase {ECO:0000313|EMBL:KJZ82915.1}; EC=3.5.1.53 {ECO:0000313|EMBL:KJZ82915.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
N-carbamoylputrescine amidase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z881_CLOBU rbh
N-carbamoylputrescine amidase
NECEvent2014_3_5_scaffold_354_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23500..23574
-----------------
DNA (75bp)
protein (25aa)
bifunctional cysteine desulfurase/selenocysteine lyase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase n=1 Tax=Klebsiella oxytoca MGH 28 RepID=V3N3E1_KLEOX
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:KJZ82913.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
Displaying 24 items

View Taxonomy