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NECEvent2014_3_5_scaffold_373

Alias: 173_003_scaffold_373

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_373_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..146)
DNA (144bp) protein (48aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCW2_CLOBU
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EEP52831.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_3_5_scaffold_373_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(401..1033)
DNA (633bp) protein (211aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiE1; thiamine-phosphate synthase ThiE (EC:2.5.1.3)
Thiamine-phosphate synthase n=2 Tax=Clostridium butyricum DKU-01 RepID=M8JNB2_CLOBU rbh
NECEvent2014_3_5_scaffold_373_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1091..1924)
DNA (834bp) protein (278aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethy
Hydroxyethylthiazole kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JM23_CLOBU rbh
hydroxyethylthiazole kinase
NECEvent2014_3_5_scaffold_373_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1949..3250)
DNA (1302bp) protein (434aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
thiC; phosphomethylpyrimidine synthase ThiC (EC:4.1.99.17)
Phosphomethylpyrimidine synthase n=2 Tax=Clostridium butyricum RepID=M8K8L0_CLOBU rbh
NECEvent2014_3_5_scaffold_373_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3453..4283)
DNA (831bp) protein (277aa)
Hydroxymethylpyrimidine phosphate kinase ThiD {ECO:0000313|EMBL:KJZ86097.1}; EC=2.7.4.7 {ECO:0000313|EMBL:KJZ86097.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Phosphomethylpyrimidine kinase n=2 Tax=Clostridium butyricum RepID=M8KGS8_CLOBU rbh
phosphomethylpyrimidine kinase
NECEvent2014_3_5_scaffold_373_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4359..4883)
DNA (525bp) protein (175aa)
ThiW protein n=2 Tax=Clostridium butyricum RepID=R0AUB6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ95471.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
thiW protein
NECEvent2014_3_5_scaffold_373_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5282..6607)
DNA (1326bp) protein (442aa)
MATE efflux family protein n=2 Tax=Clostridium butyricum RepID=M8JNA8_CLOBU rbh
MATE efflux family protein {ECO:0000313|EMBL:ENZ35621.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
multi antimicrobial extrusion protein MatE
NECEvent2014_3_5_scaffold_373_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6748..7581)
DNA (834bp) protein (278aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=M8JM18_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35620.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
AraC family transcriptional regulator
NECEvent2014_3_5_scaffold_373_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7793..7888)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASB4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35619.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_5_scaffold_373_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8057..8233)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K8K6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35618.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_373_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8781..9983)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JCV2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35617.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
arabinose efflux permease family protein
NECEvent2014_3_5_scaffold_373_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9999..10871)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z6W8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35616.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sugar-specific transcriptional regulator TrmB family protein
NECEvent2014_3_5_scaffold_373_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11034..11588)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z7E1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35615.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_5_scaffold_373_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11530..11787)
DNA (258bp) protein (86aa)
Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QZB7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86121.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AraC family transcriptional regulator
NECEvent2014_3_5_scaffold_373_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11929..13464)
DNA (1536bp) protein (512aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K8Z3_CLOBU rbh
ABC transporter ATP-binding protein uup {ECO:0000313|EMBL:KJZ86038.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
ABC transporter ATP-binding protein
NECEvent2014_3_5_scaffold_373_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13740..13964
DNA (225bp) protein (75aa)
UPI0003D63876 related cluster n=1 Tax=unknown RepID=UPI0003D63876
Uncharacterized protein {ECO:0000313|EMBL:ETI88288.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_3_5_scaffold_373_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13970..14515)
DNA (546bp) protein (182aa)
UPI0003D61D50 related cluster n=1 Tax=unknown RepID=UPI0003D61D50 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ95461.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_3_5_scaffold_373_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14634..15089)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDA1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD16429.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
RRF2 family protein
NECEvent2014_3_5_scaffold_373_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15241..16302
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNQ4_CLOBU rbh
Oxidoreductase {ECO:0000313|EMBL:KJU71081.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
FAD/FMN-binding oxidoreductase
NECEvent2014_3_5_scaffold_373_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16495..17433
DNA (939bp) protein (313aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=997898 species="Bacteria; Firmicutes; C
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=2 Tax=Clostridium butyricum RepID=M8JMG2_CLOBU rbh
NECEvent2014_3_5_scaffold_373_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17586..18509)
DNA (924bp) protein (308aa)
CspA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8Y7_CLOBU rbh
Choline binding protein A {ECO:0000313|EMBL:KJZ86125.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_5_scaffold_373_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18758..19423)
DNA (666bp) protein (222aa)
Potassium uptake protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KH79_CLOBU rbh
Potassium uptake protein {ECO:0000313|EMBL:EEP52744.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
TrkA domain-containing protein
NECEvent2014_3_5_scaffold_373_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19442..20734)
DNA (1293bp) protein (431aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
UPI0003D676CE related cluster n=1 Tax=unknown RepID=UPI0003D676CE rbh
Cation transport protein {ECO:0000313|EMBL:ETI88283.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_3_5_scaffold_373_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20810..21781)
DNA (972bp) protein (324aa)
UPI0003D5D5AB related cluster n=1 Tax=unknown RepID=UPI0003D5D5AB rbh
Putative ABC transporter, periplasmic solute-binding protein {ECO:0000313|EMBL:KJZ95474.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
hypothetical protein
Displaying 24 items

View Taxonomy