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NECEvent2014_3_5_scaffold_783_3

Organism: NECEvent2014_3_5_Bifidobacterium_MSTE12-rel_59_7

near complete RP 52 / 55 MC: 6 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(2401..2700)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XW82_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 200
  • Evalue 1.10e-48
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO97381.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 201
  • Evalue 4.00e-49
regulatory protein LacI similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 95.0
  • Bit_score: 137
  • Evalue 2.40e-30

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGCCAACCGCCATCGCTTGTCAGGAGGACGGCATCGCGATTCCACTGATTTATCAGCTTGTGCGTTGTGGCTACCGTATTCCGTCTGATATTTCCGTCATCGGCTATGACGACAGCTTCTATGCGCACGATATCGGCTTGACCACGATTCGCCAGGATCCGATTGGCATGGCACGCGAGGCGGCTTGTAAGACTCTTGACTTGATCAATCGCAAGACCACGGGTATGCCGTTTCAGACGTTCCCGGCGCAACTGATCGTTCGCTCCAGCACTTCGCGAGTGTCCTTGGATAAGGGCTAA
PROTEIN sequence
Length: 100
MPTAIACQEDGIAIPLIYQLVRCGYRIPSDISVIGYDDSFYAHDIGLTTIRQDPIGMAREAACKTLDLINRKTTGMPFQTFPAQLIVRSSTSRVSLDKG*