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NECEvent2014_3_5_scaffold_349_6

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(5878..6138)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator XRE family n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZJF3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 81.0
  • Bit_score: 86
  • Evalue 2.00e-14
Putative transcriptional regulator XRE family {ECO:0000313|EMBL:CDD43529.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environm similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 81.0
  • Bit_score: 86
  • Evalue 2.80e-14

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Taxonomy

Collinsella sp. CAG:398 → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGAAGATAGATTCACATATCGGTCATTGTATTAGCGAGTGGCGCAGAAAAGCAGGCCTTTCACAGGAGGCGCTTGCCCAAACAATTGGCTTGCAGCAAACAGCCGTGTCTAAGATTGAGGCAGGAAAGCAAAGCTTGACCGTTGAGCAGCTACTTCTTGTCCTTGATGCTTGCGGCGTTTCTGACCCAGAAGCTCTCTCTCAATTGAGAAATGGCGCCTCTAGCTCCTCGAAGCCTCTATGGGAGCGTATTGATGAATAG
PROTEIN sequence
Length: 87
MKIDSHIGHCISEWRRKAGLSQEALAQTIGLQQTAVSKIEAGKQSLTVEQLLLVLDACGVSDPEALSQLRNGASSSSKPLWERIDE*