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NECEvent2014_3_6_scaffold_26_14

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(19756..20373)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid transporter n=59 Tax=Pseudomonas RepID=G4LI29_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 205.0
  • Bit_score: 415
  • Evalue 3.40e-113
  • rbh
lysine transporter LysE similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 205.0
  • Bit_score: 415
  • Evalue 9.60e-114
Amino acid transporter LysE {ECO:0000313|EMBL:ERV68488.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 205.0
  • Bit_score: 415
  • Evalue 4.80e-113

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGTCGCTCTCCGTGGATCTGCTGCTGGCGTTCTCCCTGTTCGCCTTCGTCACCTCCGTCACGCCCGGTCCGAACAACACCATGCTGCTGGCCTCGGGGGTCAACTTCGGTTTCGTCCGCTCCATCCCGCACATCCTCGGGATCAGTTGCGGCTTCTTCATCATGGTGATGGCGGTGGGCTTCGGCCTGGGCACGGTGTTCGAGGCCTACCCGGTGCTGTACACCATCCTGCGCTACGTCGGCGCGGCCTACCTGCTGTACCTGGCCTGGAAGATCGCCACCTCCGGCCCGGCCGGCAACGACCCGGAGGGACGTGGCAAGCCGTTGAGCTACTGGGGCGCGGCGGCGTTCCAGTGGGTCAACCCGAAGGCCTGGGTGATGGCGGTCGGCGCCATCAGCACCTACACCCCGTTGCAGGGCTACTTCACCAACGTGGTGGTGATCTCGACGGTCTTCGCCCTGATCAACGCGCCGACCATCGGAATCTGGGCCGGTTTCGGCAGCATGCTGCGCAACGTGCTGCGCGATCCGCGCTGGCTGCGGGTGTTCAACGTAGGGATGGCGCTGCTGTTGGTCGCGTCGCTGTACCCGATCCTGGCGGAAAATCATTCGGCCTGA
PROTEIN sequence
Length: 206
MSLSVDLLLAFSLFAFVTSVTPGPNNTMLLASGVNFGFVRSIPHILGISCGFFIMVMAVGFGLGTVFEAYPVLYTILRYVGAAYLLYLAWKIATSGPAGNDPEGRGKPLSYWGAAAFQWVNPKAWVMAVGAISTYTPLQGYFTNVVVISTVFALINAPTIGIWAGFGSMLRNVLRDPRWLRVFNVGMALLLVASLYPILAENHSA*