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NECEvent2014_3_6_scaffold_34_17

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(16065..16424)

Top 3 Functional Annotations

Value Algorithm Source
Protein TusC homolog n=107 Tax=Pseudomonas RepID=TUSC_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 233
  • Evalue 1.40e-58
tRNA 5-methylaminomethyl-2-thiouridine synthase TusC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 233
  • Evalue 3.90e-59
Sulfur relay protein TusC/DsrF {ECO:0000313|EMBL:EZP05871.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 233
  • Evalue 1.90e-58

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGAGCCAGTCGCTGCTGATCATCAGCCGCCAGTCGCCCTGGTCCGGCCCGAGCGCCCGCGAGGCGCTGGACATAGCCCTGGCCGGCGGCGCCTTCGATCTACCGGTCGGCATGCTGTTCCTCGACGACGGCGCGTTCCAGCTGGCTCCCGGCCAGCATCCTGCGCACCTGCAGCAGAAGGACCTGCAGGCCAACCTGCAGGCCCTTCCGATGTTCGGCGTGGACGACCTCTACGTCTCGGCCCGCAGCCTGCGCGAGCGTGGCCTGGCGGAAGAGCGCCTGGCCCTCGCGGTCGAGGTGCTCGACGACCAGGCCCTGCGCGACCTGCTGCAACGCTACGACCAGGTGATTACCCTCTGA
PROTEIN sequence
Length: 120
MSQSLLIISRQSPWSGPSAREALDIALAGGAFDLPVGMLFLDDGAFQLAPGQHPAHLQQKDLQANLQALPMFGVDDLYVSARSLRERGLAEERLALAVEVLDDQALRDLLQRYDQVITL*