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NECEvent2014_3_6_scaffold_103_5

Organism: NECEvent2014_3_6_Pseudomonas_aeruginosa_65_49

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 4100..4456

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=134 Tax=Pseudomonas RepID=RL20_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 225
  • Evalue 2.90e-56
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 225
  • Evalue 8.10e-57
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 225
  • Evalue 4.00e-56

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGGCTCGTGTTAAGCGTGGCGTTATCGCCCGTCGTCGTCACAAGAAAATTCTGAAGCTCGCCAAGGGCTACTACGGTGCACGCTCGCGCGTGTTCCGCGTTGCCAAGCAGGCGGTGATCAAGGCTGGCCAATACGCCTACCGTGACCGTCGTCAGCGCAAGCGTCAGTTCCGCGCACTGTGGATCGCCCGTATCAACGCTGGTGCTCGTCAGAACGGTCTGTCCTACAGCCGCCTGATCGCCGGCCTGAAAAAGGCGGCCATCGAGATCGACCGTAAGGTCCTGGCCGATCTGGCAGTGAACGAAAAAGCGGCGTTTACCGCGATTGTCGAGAAAGCGAAGGCAAGCTTGGCTTAA
PROTEIN sequence
Length: 119
MARVKRGVIARRRHKKILKLAKGYYGARSRVFRVAKQAVIKAGQYAYRDRRQRKRQFRALWIARINAGARQNGLSYSRLIAGLKKAAIEIDRKVLADLAVNEKAAFTAIVEKAKASLA*