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NECEvent2014_3_1_scaffold_336_7

Organism: NECEvent2014_3_1_Clostridium_butyricum_28_8

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(6291..6989)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=4 Tax=Clostridium butyricum RepID=B1QYS7_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 232.0
  • Bit_score: 452
  • Evalue 2.80e-124
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 232.0
  • Bit_score: 450
  • Evalue 1.20e-123
sigK; RNA polymerase sigma-28 factor SigK similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 232.0
  • Bit_score: 423
  • Evalue 5.20e-116

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 699
GTGTTTATATTAAATGGCTTAGTTGAGCTTATATGCAATTCCTTTTTTTTAACAGGATATATAACCAACAACAATACTTTTCCATTACCACTAGATGAAGAAGAGGAACAAATGTACTTAAAGAAATTTAAAGAAGGAGATAAAAGTGCTAAAAGTATATTGATAGAAAGAAACTTAAGATTAGTAGCTCATATTGTTAAAAAATATTCTTTCCCAAATAAAGACGTAGATGAATTGATTTCAATAGGAACAGTAGGGCTAATAAAAGCAATTGATTCTTTTGATTCTAGTAAGGGAACTAGACTTGCTACTTATGCTTCAAGGTGTATAGAAAATGAAATTTTAATGCTATTTAGAAATAATAAAAAGCAGAAGAGTGAAGTTTATCTCCAAGATCCGATTGGAGTTGATAAGGAAGGCAATGAGTTTTGTCTAATGGATATATTAAGCAGTGAAAAAGATTCAGTACTAGATAAAGTAGAAAGTAATCTGCAAGTTAGAGCTTTGTATAAGAAACTTGGTGAATCATTAACAAGCAGAGAAAGTTCAATATTAATAATGAGATACGGATTAATTGACGGAAAATGCAAAACACAAAGAGAAATAGCTAGCAATTTAGGAATATCACGTTCATATGTTTCAAGAATTGAGAAAAAAGCATTAAAAAAATTGAAGAAAGAACTATATTCAAAAAATTAA
PROTEIN sequence
Length: 233
VFILNGLVELICNSFFLTGYITNNNTFPLPLDEEEEQMYLKKFKEGDKSAKSILIERNLRLVAHIVKKYSFPNKDVDELISIGTVGLIKAIDSFDSSKGTRLATYASRCIENEILMLFRNNKKQKSEVYLQDPIGVDKEGNEFCLMDILSSEKDSVLDKVESNLQVRALYKKLGESLTSRESSILIMRYGLIDGKCKTQREIASNLGISRSYVSRIEKKALKKLKKELYSKN*