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NECEvent2014_3_1_scaffold_947

Alias: 173_005_scaffold_947

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_1_scaffold_947_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2..82)
DNA (81bp) protein (27aa)
Transposase IS200-like protein (Fragment) n=1 Tax=Staphylococcus epidermidis IS-250 RepID=I0TJG5_STAEP
Transposase-like protein {ECO:0000313|EMBL:EES34840.1}; Flags: Fragment;; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;
IS605/IS200-like transposase
NECEvent2014_3_1_scaffold_947_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(263..748)
DNA (486bp) protein (162aa)
Transcription elongation factor GreA n=27 Tax=Staphylococcus epidermidis RepID=C5QXL7_STAEP rbh
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=525375 species="Bacteria
Transcription elongation factor GreA
NECEvent2014_3_1_scaffold_947_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(770..1393)
DNA (624bp) protein (208aa)
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|
Uridine kinase n=51 Tax=Staphylococcus epidermidis RepID=URK_STAEQ rbh
NECEvent2014_3_1_scaffold_947_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1393..2661)
DNA (1269bp) protein (423aa)
Peptidase, U32 family {ECO:0000313|EMBL:EFE59832.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFE59832.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcu
Peptidase, U32 family n=48 Tax=Staphylococcus epidermidis RepID=Q5HNT8_STAEQ rbh
U32 family peptidase
NECEvent2014_3_1_scaffold_947_5
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2679..3602)
DNA (924bp) protein (308aa)
Peptidase, U32 family n=58 Tax=Staphylococcus epidermidis RepID=Q5HNT7_STAEQ rbh
peptidase, U32 family small subunit [C1]
U32 family peptidase {ECO:0000313|EMBL:ETJ09809.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_3_1_scaffold_947_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3605..4240)
DNA (636bp) protein (212aa)
O-methyltransferase family protein n=57 Tax=Staphylococcus epidermidis RepID=Q5HNT6_STAEQ rbh
methyltransferase small domain protein
O-methyltransferase {ECO:0000313|EMBL:EFE59830.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_3_1_scaffold_947_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4669..4977)
DNA (309bp) protein (103aa)
UPF0473 protein SERP1179 n=78 Tax=Staphylococcus epidermidis RepID=Y1179_STAEQ
hypothetical protein
UPF0473 protein HMPREF0794_0387 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey)
NECEvent2014_3_1_scaffold_947_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4992..5420)
DNA (429bp) protein (143aa)
Putative Holliday junction resolvase (EC:3.1.-.-)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=525375 specie
Putative Holliday junction resolvase n=52 Tax=Staphylococcus epidermidis RepID=RUVX_STAEQ
NECEvent2014_3_1_scaffold_947_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5422..5550)
DNA (129bp) protein (43aa)
UPF0297 protein SERP1181 n=80 Tax=Staphylococcus epidermidis RepID=Y1181_STAEQ
Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase
UPF0297 protein M464_0203370 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
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