ggKbase home page

NECEvent2014_9_1_Candida_parapsilosis_39_137

NECEvent2014_9_1_Candida_parapsilosis_39_129
In projects: NECEvent2014_9_1

Consensus taxonomy: Candida parapsilosis  →  Candida  →  Saccharomycetales  →  Saccharomycetes  →  Ascomycota  →  Fungi

Taxonomy override: Eukaryote

Description

Bin incl. rRNA 100% identity to Candida parapsilosis strain CDC317. 16s rRNA also in Mitochondria bin

Displaying items 251-300 of 405 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_9_1_scaffold_254 182_001_scaffold_254
Species: Candida parapsilosis (100%)
7 17109 bp 39.47 131.45 88.46
NECEvent2014_9_1_scaffold_143 182_001_scaffold_143
Species: Candida parapsilosis (76%)
25 48096 bp 39.15 131.47 69.96
NECEvent2014_9_1_scaffold_136 182_001_scaffold_136
Species: Candida parapsilosis (93.33%)
15 37367 bp 39.62 131.49 79.97
NECEvent2014_9_1_scaffold_246 182_001_scaffold_246
Species: Candida parapsilosis (85%)
20 33530 bp 39.79 131.52 68.30
NECEvent2014_9_1_scaffold_297 182_001_scaffold_297
Species: Candida parapsilosis (100%)
9 13040 bp 39.03 131.61 71.62
NECEvent2014_9_1_scaffold_208 182_001_scaffold_208
Species: Candida parapsilosis (61.54%)
13 23423 bp 38.49 131.61 64.32
NECEvent2014_9_1_scaffold_25 182_001_scaffold_25
Species: Candida parapsilosis (87.93%)
58 97491 bp 39.61 131.62 74.41
NECEvent2014_9_1_scaffold_142 182_001_scaffold_142
Species: Candida parapsilosis (76.92%)
26 38417 bp 38.99 131.66 70.70
NECEvent2014_9_1_scaffold_356 182_001_scaffold_356
Species: Candida parapsilosis (71.43%)
7 12971 bp 38.29 131.84 54.91
NECEvent2014_9_1_scaffold_201 182_001_scaffold_201
Species: Candida parapsilosis (90%)
10 24810 bp 38.36 131.90 77.69
NECEvent2014_9_1_scaffold_85 182_001_scaffold_85
Species: Candida parapsilosis (78.79%)
33 51995 bp 38.33 131.97 81.82
NECEvent2014_9_1_scaffold_220 182_001_scaffold_220
Species: Candida parapsilosis (92.31%)
13 21558 bp 38.06 132.02 68.42
NECEvent2014_9_1_scaffold_79 182_001_scaffold_79
Species: Candida parapsilosis (89.19%)
37 64399 bp 38.62 132.05 62.48
NECEvent2014_9_1_scaffold_105 182_001_scaffold_105
Species: Candida parapsilosis (76.19%)
42 50923 bp 39.67 132.18 85.04
NECEvent2014_9_1_scaffold_266 182_001_scaffold_266
Species: Candida parapsilosis (87.5%)
8 15903 bp 38.95 132.20 80.76
NECEvent2014_9_1_scaffold_229 182_001_scaffold_229
Species: Candida parapsilosis (50%)
20 20663 bp 38.31 132.22 75.24
NECEvent2014_9_1_scaffold_993 182_001_scaffold_993
Species: Candida parapsilosis (100%)
2 1622 bp 38.41 132.24 36.62
NECEvent2014_9_1_scaffold_414 182_001_scaffold_414
Species: Candida parapsilosis (50%)
6 7351 bp 39.90 132.29 89.95
NECEvent2014_9_1_scaffold_103 182_001_scaffold_103
Species: Candida parapsilosis (82%)
50 93023 bp 38.88 132.55 70.68
NECEvent2014_9_1_scaffold_124 182_001_scaffold_124
Species: Candida parapsilosis (84.38%)
32 40861 bp 38.57 132.66 64.44
NECEvent2014_9_1_scaffold_37 182_001_scaffold_37
Species: Candida parapsilosis (91.67%)
36 83734 bp 39.30 132.70 80.50
NECEvent2014_9_1_scaffold_97 182_001_scaffold_97
Species: Candida parapsilosis (80%)
30 47514 bp 38.69 132.75 67.82
NECEvent2014_9_1_scaffold_100 182_001_scaffold_100
Species: Candida parapsilosis (85.42%)
48 90353 bp 38.15 133.00 73.18
NECEvent2014_9_1_scaffold_373 182_001_scaffold_373
Species: Candida parapsilosis (70%)
10 12509 bp 39.52 133.04 69.33
NECEvent2014_9_1_scaffold_150 182_001_scaffold_150
Species: Candida parapsilosis (85%)
20 34195 bp 38.87 133.06 75.13
NECEvent2014_9_1_scaffold_830 182_001_scaffold_830
Species: Candida parapsilosis (50%)
2 1949 bp 38.38 133.15 66.50
NECEvent2014_9_1_scaffold_650 182_001_scaffold_650
Genus: Candida (66.67%)
3 2538 bp 38.81 133.16 45.04
NECEvent2014_9_1_scaffold_226 182_001_scaffold_226
Species: Candida parapsilosis (88.89%)
9 20848 bp 39.45 133.26 80.50
NECEvent2014_9_1_scaffold_310 182_001_scaffold_310
Species: Candida parapsilosis (87.5%)
8 12931 bp 39.83 133.46 65.45
NECEvent2014_9_1_scaffold_168 182_001_scaffold_168
Species: Candida parapsilosis (85.71%)
21 30861 bp 40.32 133.59 78.32
NECEvent2014_9_1_scaffold_386 182_001_scaffold_386
Species: Candida parapsilosis (85.71%)
7 6920 bp 39.23 133.68 74.05
NECEvent2014_9_1_scaffold_61 182_001_scaffold_61
Species: Candida parapsilosis (85.71%)
42 64998 bp 39.09 133.82 79.31
NECEvent2014_9_1_scaffold_174 182_001_scaffold_174
Species: Candida parapsilosis (81.82%)
22 28978 bp 39.75 134.20 83.43
NECEvent2014_9_1_scaffold_155 182_001_scaffold_155
Species: Candida parapsilosis (76.47%)
17 32724 bp 38.83 134.25 67.35
NECEvent2014_9_1_scaffold_329 182_001_scaffold_329
Species: Candida parapsilosis (80%)
5 10667 bp 38.89 134.32 77.99
NECEvent2014_9_1_scaffold_22 182_001_scaffold_22
Species: Candida parapsilosis (84.21%)
57 110183 bp 39.47 134.36 75.98
NECEvent2014_9_1_scaffold_244 182_001_scaffold_244
Species: Candida parapsilosis (75%)
12 18314 bp 39.91 134.61 77.89
NECEvent2014_9_1_scaffold_29 182_001_scaffold_29
Species: Candida parapsilosis (79.63%)
54 93021 bp 39.04 134.88 74.40
NECEvent2014_9_1_scaffold_385 182_001_scaffold_385
Species: Candida parapsilosis (66.67%)
3 7064 bp 41.78 135.24 94.62
NECEvent2014_9_1_scaffold_184 182_001_scaffold_184
Species: Candida parapsilosis (64.29%)
14 26907 bp 38.92 135.33 78.23
NECEvent2014_9_1_scaffold_977 182_001_scaffold_977
Species: Candida parapsilosis (100%)
2 1658 bp 38.96 135.52 72.20
NECEvent2014_9_1_scaffold_213 182_001_scaffold_213
Species: Candida parapsilosis (84.62%)
13 27592 bp 39.57 135.63 71.67
NECEvent2014_9_1_scaffold_241 182_001_scaffold_241
Species: Candida parapsilosis (76.92%)
13 18791 bp 38.41 135.67 83.38
NECEvent2014_9_1_scaffold_160 182_001_scaffold_160
Species: Candida parapsilosis (69.57%)
23 33993 bp 38.09 135.72 73.31
NECEvent2014_9_1_scaffold_145 182_001_scaffold_145
Species: Candida parapsilosis (95%)
20 35116 bp 39.26 135.75 83.36
NECEvent2014_9_1_scaffold_203 182_001_scaffold_203
Species: Candida parapsilosis (91.67%)
12 24439 bp 38.88 135.91 79.67
NECEvent2014_9_1_scaffold_52 182_001_scaffold_52
Species: Candida parapsilosis (77.08%)
48 89203 bp 38.57 136.03 70.70
NECEvent2014_9_1_scaffold_315 182_001_scaffold_315
Species: Candida parapsilosis (71.43%)
7 12785 bp 37.76 136.05 63.27
NECEvent2014_9_1_scaffold_223 182_001_scaffold_223
Species: Candida parapsilosis (73.68%)
19 34180 bp 38.65 136.11 65.17
NECEvent2014_9_1_scaffold_270 182_001_scaffold_270
Species: Candida parapsilosis (75%)
8 15574 bp 39.01 136.23 65.01
Displaying items 251-300 of 405 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.