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NECEvent2014_9_1_scaffold_41

Alias: 182_001_scaffold_41

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_9_1_scaffold_41_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(374..622)
DNA (249bp) protein (83aa)
Ferredoxin n=2 Tax=Staphylococcus epidermidis RepID=J0ZB54_STAEP
Ferredoxin
Ferredoxin {ECO:0000313|EMBL:EES36210.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_9_1_scaffold_41_2

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755..1693
DNA (939bp) protein (313aa)
Uncharacterized protein n=30 Tax=Staphylococcus epidermidis RepID=Q8CSH3_STAES rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ18677.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_41_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1680..3059
DNA (1380bp) protein (460aa)
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:EFE59690.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFE59690.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" sou
ATP-dependent DNA helicase RecQ n=40 Tax=Staphylococcus epidermidis RepID=Q5HP64_STAEQ rbh
Probable ATP-dependent DNA helicase RecQ
NECEvent2014_9_1_scaffold_41_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3180..4574
DNA (1395bp) protein (465aa)
Elastin-binding protein EbpS n=7 Tax=Staphylococcus epidermidis RepID=H3VCF9_STAEP rbh
Elastin-binding protein EbpS {ECO:0000313|EMBL:EFE59691.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Elastin binding protein EbpS
NECEvent2014_9_1_scaffold_41_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4707..5693
DNA (987bp) protein (329aa)
Thioredoxin reductase (EC:1.8.1.9)
Pyridine nucleotide-disulfide oxidoreductase family protein n=72 Tax=Staphylococcus epidermidis RepID=Q5HP66_STAEQ rbh
Thioredoxin reductase {ECO:0000313|EMBL:ESV19503.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_9_1_scaffold_41_6

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comp(5905..6873)
DNA (969bp) protein (323aa)
L-asparaginase (EC:3.5.1.1)
L-asparaginase n=42 Tax=Staphylococcus epidermidis RepID=Q5HP67_STAEQ rbh
Putative asparaginase {ECO:0000313|EMBL:ETJ18673.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_41_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6952..7599
DNA (648bp) protein (216aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=8 Tax=Staphylococcus epidermidis RepID=F3SYV7_STAEP rbh
NECEvent2014_9_1_scaffold_41_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


8083..9261
DNA (1179bp) protein (393aa)
30S ribosomal protein S1 n=46 Tax=Staphylococcus epidermidis RepID=RS1_STAEQ rbh
rpsA; 30S ribosomal protein S1
Putative ribosomal protein S1 {ECO:0000313|EMBL:EFE59695.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_41_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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9477..10787
DNA (1311bp) protein (437aa)
GTPase Der n=29 Tax=Staphylococcus epidermidis RepID=F3SYV5_STAEP rbh
engA; ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillale
NECEvent2014_9_1_scaffold_41_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10808..11806
DNA (999bp) protein (333aa)
Glycerol-3-phosphate dehydrogenase [NAD(P) ] (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=46 Tax=Staphylococcus epidermidis RepID=GPDA_STAEQ rbh
NECEvent2014_9_1_scaffold_41_11
Staphylococcus caprae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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11977..12249
DNA (273bp) protein (91aa)
DNA-binding protein HU n=502 Tax=Staphylococcus RepID=DBH_STAAC
DNA-binding protein HU
DNA-binding protein HU {ECO:0000313|EMBL:EES40119.1}; TaxID=525378 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus caprae M23864:W1.;"
NECEvent2014_9_1_scaffold_41_12

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12719..13297
DNA (579bp) protein (193aa)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q5HP73_STAEQ rbh
hypothetical protein, similar to component A of hexaprenyl diphosphate synthase
Uncharacterized protein {ECO:0000313|EMBL:ETJ18668.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_41_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13290..14015
DNA (726bp) protein (242aa)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Demethylmenaquinone methyltransferase {ECO:0000255|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000255|HAMAP-Rule:MF_01813};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcu
Demethylmenaquinone methyltransferase n=51 Tax=Staphylococcus epidermidis RepID=UBIE_STAEQ rbh
NECEvent2014_9_1_scaffold_41_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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14017..14976
DNA (960bp) protein (320aa)
Putative heptaprenyl diphosphate synthase component II {ECO:0000313|EMBL:EFE59701.1}; EC=2.5.1.30 {ECO:0000313|EMBL:EFE59701.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staph
Polyprenyl synthetase n=44 Tax=Staphylococcus epidermidis RepID=Q5HP75_STAEQ rbh
heptaprenyl diphosphate syntase component II
NECEvent2014_9_1_scaffold_41_15

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15095..15565
DNA (471bp) protein (157aa)
Nucleoside diphosphate kinase n=3 Tax=Staphylococcus epidermidis RepID=D4FIM2_STAEP rbh
ndk; nucleoside diphosphate kinase
Nucleoside diphosphate kinase {ECO:0000313|EMBL:ETJ18665.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_41_16

Not on your lists

15974..17212
DNA (1239bp) protein (413aa)
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=49 Tax=Staphylococcus epidermidis RepID=AROC_STAEQ rbh
Chorismate synthase {ECO:0000313|EMBL:ETJ18664.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_41_17

Not on your lists

17240..18304
DNA (1065bp) protein (355aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=44 Tax=Staphylococcus epidermidis RepID=AROB_STAEQ rbh
3-dehydroquinate synthase {ECO:0000313|EMBL:ETJ18663.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_41_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18314..19615
DNA (1302bp) protein (434aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=23 Tax=Staphylococcus epidermidis RepID=AROA_STAEQ rbh
NECEvent2014_9_1_scaffold_41_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19619..20863
DNA (1245bp) protein (415aa)
Uncharacterized protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HP80_STAEQ rbh
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFE59706.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_41_20

Not on your lists

20877..21440
DNA (564bp) protein (188aa)
UPF0302 protein SERP1032 n=46 Tax=Staphylococcus epidermidis RepID=Y1032_STAEQ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ18660.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_41_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21452..22045
DNA (594bp) protein (198aa)
Uncharacterized protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HP82_STAEQ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59708.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_41_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22090..22785
DNA (696bp) protein (232aa)
Uncharacterized protein n=56 Tax=Staphylococcus epidermidis RepID=Q5HP83_STAEQ rbh
probable metal-dependent peptidase
Uncharacterized protein {ECO:0000313|EMBL:AAW54414.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_9_1_scaffold_41_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22966..23283
DNA (318bp) protein (106aa)
MazG family protein n=1 Tax=Staphylococcus epidermidis NIHLM049 RepID=J0NXA6_STAEP
MazG nucleotide pyrophosphohydrolase
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EFE59710.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis
NECEvent2014_9_1_scaffold_41_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23305..24447
DNA (1143bp) protein (381aa)
Glycosyl transferase, group 1 family protein n=46 Tax=Staphylococcus epidermidis RepID=Q5HP85_STAEQ rbh
bshA; N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:AAW54412.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strai
NECEvent2014_9_1_scaffold_41_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24437..25639
DNA (1203bp) protein (401aa)
tRNA nucleotidyltransferase (EC:2.7.7.72)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01263}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01263};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=47 Tax=Staphylococcus epidermidis RepID=CCA_STAEQ rbh
NECEvent2014_9_1_scaffold_41_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25626..26597
DNA (972bp) protein (324aa)
biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15)
BirA bifunctional protein n=42 Tax=Staphylococcus epidermidis RepID=Q5HP87_STAEQ rbh
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
NECEvent2014_9_1_scaffold_41_27

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26622..29330
DNA (2709bp) protein (903aa)
Probable ATP-dependent helicase DinG homolog n=42 Tax=Staphylococcus epidermidis RepID=DING_STAEQ rbh
DinG family ATP-dependent helicase YoaA
Putative ATP-dependent helicase dinG-like protein {ECO:0000313|EMBL:ETJ18653.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_41_28

Not on your lists

29451..30743
DNA (1293bp) protein (431aa)
Asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=48 Tax=Staphylococcus epidermidis RepID=SYN_STAEQ rbh
Asparagine-tRNA ligase {ECO:0000313|EMBL:ETJ18652.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_41_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30836..31522
DNA (687bp) protein (229aa)
DNA replication protein DnaD, putative n=47 Tax=Staphylococcus epidermidis RepID=Q5HP90_STAEQ rbh
Chromosome replication initiation protein dnaD
DnaD domain protein {ECO:0000313|EMBL:EFE59716.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_41_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31512..32171
DNA (660bp) protein (220aa)
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
Endonuclease III n=38 Tax=Staphylococcus epidermidis RepID=Q5HP91_STAEQ rbh
Displaying items 1-30 of 49 in total

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