ggKbase home page

NECEvent2014_9_1_scaffold_252

Alias: 182_001_scaffold_252

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_9_1_scaffold_252_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..175
DNA (174bp) protein (58aa)
Uncharacterized protein n=4 Tax=Staphylococcus epidermidis RepID=J1A8G2_STAEP
truncated transposase
IS1272 transposase {ECO:0000313|EMBL:EIL87475.1}; Flags: Fragment;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
NECEvent2014_9_1_scaffold_252_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(452..1267)
DNA (816bp) protein (272aa)
GufA protein, putative n=68 Tax=Staphylococcus epidermidis RepID=Q5HR13_STAEQ rbh
Metal transporter, ZIP family
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:ESV19016.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_9_1_scaffold_252_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1395..3278
DNA (1884bp) protein (628aa)
ABC transporter, ATP-binding protein n=23 Tax=Staphylococcus RepID=Q5HR12_STAEQ rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE58019.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey
COG0488: ATPase components of ABC transporters with duplicated ATPase domains
NECEvent2014_9_1_scaffold_252_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3292..5070
DNA (1779bp) protein (593aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AAW53765.1}; EC=3.6.1.- {ECO:0000313|EMBL:AAW53765.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Sta
ATP-dependent DNA helicase RecQ n=36 Tax=Staphylococcus epidermidis RepID=Q5HR11_STAEQ rbh
ATP-dependent DNA helicase RecQ
NECEvent2014_9_1_scaffold_252_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5270..6244
DNA (975bp) protein (325aa)
Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC:3.6.3.32)
ABC transporter, ATP-binding protein n=22 Tax=Staphylococcus epidermidis RepID=Q5HR10_STAEQ rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE58021.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey
NECEvent2014_9_1_scaffold_252_6

Not on your lists

6237..7751
DNA (1515bp) protein (505aa)
ABC transporter, permease protein n=30 Tax=Staphylococcus epidermidis RepID=Q5HR09_STAEQ rbh
ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:ETJ19868.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_252_7

Not on your lists

7888..9009
DNA (1122bp) protein (374aa)
Biosynthetic Aromatic amino acid aminotransferase beta (EC:2.6.1.57)
Histidinol-phosphate aminotransferase n=36 Tax=Staphylococcus epidermidis RepID=HIS8_STAEQ rbh
Histidinol-phosphate aminotransferase {ECO:0000313|EMBL:ETJ19869.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_9_1_scaffold_252_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9132..9671
DNA (540bp) protein (180aa)
Putative 5'(3')-deoxyribonucleotidase; EC=3.1.3.-;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Putative 5'(3')-deoxyribonucleotidase n=41 Tax=Staphylococcus epidermidis RepID=53DR_STAEQ rbh
hypothetical protein
NECEvent2014_9_1_scaffold_252_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9738..12347)
DNA (2610bp) protein (870aa)
Alcohol dehydrogenase ; Acetaldehyde dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase, iron-containing n=23 Tax=Staphylococcus RepID=Q5HR06_STAEQ rbh
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_252_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12746..13669)
DNA (924bp) protein (308aa)
Putative lipid kinase SERP0390; EC=2.7.1.-;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Putative lipid kinase SERP0390 n=43 Tax=Staphylococcus epidermidis RepID=Y390_STAEQ rbh
Transcription regulator [contains diacylglycerol kinase catalytic domain] rbh
NECEvent2014_9_1_scaffold_252_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13879..14040)
DNA (162bp) protein (54aa)
Uncharacterized protein n=25 Tax=Staphylococcus epidermidis RepID=Q8CTG6_STAES
hypothetical protein
IS1272, transposase {ECO:0000313|EMBL:EFE58027.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_9_1_scaffold_252_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14324..15829)
DNA (1506bp) protein (502aa)
Di-tripeptide transporter, putative n=45 Tax=Staphylococcus epidermidis RepID=Q5HR04_STAEQ rbh
Di/tripeptide permease YjdL
Di-tripeptide transporter, putative {ECO:0000313|EMBL:AAW53772.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35
NECEvent2014_9_1_scaffold_252_13
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16114..16614)
DNA (501bp) protein (167aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
NADPH-dependent 7-cyano-7-deazaguanine reductase n=49 Tax=Staphylococcus epidermidis RepID=QUEF_STAEQ rbh
7-cyano-7-deazaguanine reductase
NECEvent2014_9_1_scaffold_252_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16628..17503)
DNA (876bp) protein (292aa)
Membrane protein, putative n=26 Tax=Staphylococcus epidermidis RepID=Q5HR01_STAEQ rbh
Integral membrane domain protein
Membrane protein, putative {ECO:0000313|EMBL:AAW53775.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP6
Displaying 14 items

View Taxonomy