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NECEvent2014_9_1_scaffold_46_8

Organism: NECEvent2014_9_1_Staphylococcus_epidermidis_31_42

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5002..6213)

Top 3 Functional Annotations

Value Algorithm Source
DEAD-box ATP-dependent RNA helicase CshA {ECO:0000256|HAMAP-Rule:MF_01493}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_01493};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphyloco similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 403.0
  • Bit_score: 797
  • Evalue 8.80e-228
DEAD/DEAH box helicase n=1 Tax=Staphylococcus epidermidis BCM-HMP0060 RepID=C5QD09_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 403.0
  • Bit_score: 797
  • Evalue 6.20e-228
  • rbh
Cold-shock DEAD-box protein A similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 403.0
  • Bit_score: 795
  • Evalue 6.70e-228

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Taxonomy

Staphylococcus sp. DORA_6_22 → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1212
ATGCCTATTGAAAGACAGATTAAAGCATTAAAAAGAGGCCCTCAAATTGTAGTAGGTACGCCGGGAAGAGTTATTGATCATCTTAATCGTCGTACACTTAAAACTCAAGGAATTCACACGCTTATTTTAGATGAAGCAGATGAAATGATGAATATGGGATTCATCGATGATATGAGATTTATTATGGATAAAATTCCAGCTGAACAACGTCAAACTATGCTATTTTCTGCTACGATGCCAAAAGCAATCCAAGAATTGGTACAGCAGTTTATGAAAGCTCCTAAAATAATTAAGACAATGAATAATGAAATGTCAGATCCTCAAATTGATGAATATTATACAATCGTTAAAGAATTAGAGAAATTTGATACATTTACAAACTTTTTAGATGTTCATCAGCCTGAATTGGCGATTGTCTTTGGTCGTACTAAGCGTCGCGTAGATGAATTAACAAGCGCGCTATTATCTAAAGGATACAAAGCAGAAGGTTTACATGGGGATATTACCCAAGCAAAACGTTTAGAAGTATTGAAGAAATTTAAGAACGATCAAATAGATATTTTAGTTGCTACAGATGTGGCTGCACGTGGTCTTGATATTTCTGGTGTGAGTCATGTTTATAATTTTGATATCCCTCAAGATACAGAAAGTTATACGCACCGTATTGGACGTACTGGTCGAGCAGGAAAAGAAGGTATTGCAGTTACTTTTGTAAATCCAATTGAGATGGATTATATTCGACAAATTGAAGATGTCAATAATCGTCGAATGAAAGCATTAAGACCTCCACATCGTAAAGAGGTGCTTAAAGCGCGTGAAGATGATATTAAAGATAGAGTTCAAAACTGGATGTCAAGAGAAAATGAGCCACGTTTACAAAGAATATCAAGTGAATTACTTAAAGAATATGATAGTACAGAATTAGTAGCCTCTTTACTTCAAGAACTTGTAGAAGCTAATGATGAAGTGGAAGTACAATTAACTTTTGAAAAACCATTAGCACGTAAAAATCGCAGTAATAAAGGCGGTTCTAGAAGAAGTAATCATAAACGTGGTAATGGTAAGTTTGATAATAAAAATAGACGATCAAAAGGGTCTAAAGGTCAATCAAGCAAAAAGAAAAACCAAAAGAAATTTGACCGTAGAGATAAGCAACAAAAAAGTGGTAATCAATCACTAAAAGGTCGCACATTTGCTGATCACCAAAAATAA
PROTEIN sequence
Length: 404
MPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTMLFSATMPKAIQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDVNNRRMKALRPPHRKEVLKAREDDIKDRVQNWMSRENEPRLQRISSELLKEYDSTELVASLLQELVEANDEVEVQLTFEKPLARKNRSNKGGSRRSNHKRGNGKFDNKNRRSKGSKGQSSKKKNQKKFDRRDKQQKSGNQSLKGRTFADHQK*