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NECEvent2014_3_4_scaffold_470

Alias: 173_002_scaffold_470

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_470_1
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3..434)
DNA (432bp) protein (144aa)
Site-specific recombinase, phage integrase family n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2UA86_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42668.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_4_scaffold_470_2
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(677..1024)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2U9R7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42667.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_4_scaffold_470_3
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1033..1680)
DNA (648bp) protein (216aa)
Peptidase S24-like protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2UBI9_9ACTN rbh
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EUB32786.1}; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli
XRE family transcriptional regulator
NECEvent2014_3_4_scaffold_470_4
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1854..2045
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BVQ8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42665.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_470_5
unknown

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comp(2111..2578)
DNA (468bp) protein (156aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_470_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2830..3222
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Atopobium minutum 10063974 RepID=N2C0G6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42664.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_4_scaffold_470_7
unknown

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3226..3681
DNA (456bp) protein (152aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_470_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3703..5139
DNA (1437bp) protein (479aa)
AAA domain protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2VSI8_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42662.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_470_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5154..6260
DNA (1107bp) protein (369aa)
AAA domain protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2UAH9_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42661.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_470_10
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6308..6997
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BVQ3_9ACTN
phage protein
Uncharacterized protein {ECO:0000313|EMBL:EMZ42660.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_4_scaffold_470_11
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6998..9697
DNA (2700bp) protein (900aa)
Type III restriction enzyme, res subunit n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2UA22_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ42659.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
DNA/RNA helicase
NECEvent2014_3_4_scaffold_470_12
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9720..10133
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2TQG2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42658.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
hypothetical protein
NECEvent2014_3_4_scaffold_470_13
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10136..10477
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Atopobium minutum 10063974 RepID=N2BQW0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42656.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_4_scaffold_470_14
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10480..10899
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2VRD7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42655.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
NECEvent2014_3_4_scaffold_470_15
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10997..11380
DNA (384bp) protein (128aa)
AAA domain protein n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2VJL0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42654.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
recombinase A
Displaying 15 items

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