ggKbase home page

ACD80_114

Alias: ACD80p_13163.11860.10

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD80_114_1
ACD80, SR1, Bacteria

Not on your lists

2..1162
-----------------
DNA (1161bp)
protein (387aa)
hypothetical protein
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=137 to=322 evalue=2.1e-14)
(db=HMMPfam db_id=PF00395 from=16 to=51 evalue=1.4e-07 interpro_id=IPR001119 interpro_description=S-layer homology domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=147 to=291 evalue=3.8e-07)
ACD80_114_2
ACD80, SR1, Bacteria

Not on your lists

1186..1500
-----------------
DNA (315bp)
protein (105aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=101)
seg (db=Seg db_id=seg from=17 to=29)
ACD80_114_3
ACD80, SR1, Bacteria

Not on your lists

comp(1670..1993)
-----------------
DNA (324bp)
protein (108aa)
1670..1993 - ( gc_cont=0.318)
hypothetical protein Tax=ACD80
ACD80_114_4
unknown

Not on your lists

comp(2022..5144)
-----------------
DNA (3123bp)
protein (1041aa)
type I restriction-modification system restriction subunit (EC:3.1.21.3)
type I restriction-modification system restriction subunit (EC:3.1.21.3)
coiled-coil (db=Coil db_id=coil from=510 to=531 evalue=NA)
ACD80_114_5
ACD80, SR1, Bacteria

Not on your lists

comp(5166..6062)
-----------------
DNA (897bp)
protein (299aa)
5166..6062 - ( gc_cont=0.283)
hypothetical protein Tax=ACD80
ACD80_114_6
ACD80, SR1, Bacteria

Not on your lists

comp(6064..7107)
-----------------
DNA (1044bp)
protein (348aa)
coiled-coil (db=Coil db_id=coil from=45 to=66 evalue=NA)
coiled-coil 45..66 Tax=ACD80
ACD80_114_7
unknown

Not on your lists

comp(7187..8464)
-----------------
DNA (1278bp)
protein (426aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Pseudomonas mendocina RepID=B3SPW7_PSEME (db=UNIREF evalue=1.0e-11 bit_score=75.5 identity=36.61 coverage=25.3521126760563)
seg (db=Seg db_id=seg from=389 to=402)
seg (db=Seg db_id=seg from=136 to=151)
ACD80_114_8
unknown

Not on your lists

comp(8481..9734)
-----------------
DNA (1254bp)
protein (418aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Francisella novicida FTG RepID=E2MSH4_FRANO (db=UNIREF evalue=5.0e-79 bit_score=298.0 identity=43.38 coverage=93.5406698564593)
coiled-coil (db=Coil db_id=coil from=179 to=207 evalue=NA)
DNA methylase specificity domain (db=superfamily db_id=SSF116734 from=14 to=208 evalue=4.7e-42)
ACD80_114_9
ACD80, SR1, Bacteria

Not on your lists

comp(9740..10171)
-----------------
DNA (432bp)
protein (144aa)
seg (db=Seg db_id=seg from=107 to=121)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=124)
seg 107..121 Tax=ACD80
ACD80_114_10
unknown

Not on your lists

comp(10181..11689)
-----------------
DNA (1509bp)
protein (503aa)
type I restriction-modification system methylation subunit
type I restriction-modification system methylation subunit
coiled-coil (db=Coil db_id=coil from=470 to=491 evalue=NA)
Displaying 10 items

View Taxonomy