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ACD80_115

Alias: ACD80p_39049.10383.19

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD80_115_1
ACD80, SR1, Bacteria

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322..453
-----------------
DNA (132bp)
protein (44aa)
322..453 + ( gc_cont=0.523)
hypothetical protein Tax=ACD80
contig has partial 16S, first ~ 500 bp are NNN Jill Banfield (8/9/13)
ACD80_115_16S_1
unknown

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3643..5200
-----------------
DNA (1558bp)
ACD80_115_2
ACD80, SR1, Bacteria

Not on your lists

5411..6016
-----------------
DNA (606bp)
protein (202aa)
hypothetical protein (db=KEGG evalue=8.0e-10 bit_score=66.6 identity=24.5 coverage=96.039603960396)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
ACD80_115_3
ACD80, SR1, Bacteria

Not on your lists

comp(6152..6568)
-----------------
DNA (417bp)
protein (139aa)
6152..6568 - ( gc_cont=0.317)
hypothetical protein Tax=ACD80
ACD80_115_4
ACD80, SR1, Bacteria

Not on your lists

comp(6741..7601)
-----------------
DNA (861bp)
protein (287aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=102 to=134)
ACD80_115_5
ACD80, SR1, Bacteria

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comp(8073..8372)
-----------------
DNA (300bp)
protein (100aa)
(db=HMMPfam db_id=PF09876 from=12 to=92 evalue=2.0e-11 interpro_id=IPR018664 interpro_description=Protein of unknown function DUF2103, metal-binding)
(db=HMMPfam db_id=PF09876 from=12 to=92 evalue=2.0e-11 interpro_id=IPR018664 interpro_description=Protein of unknown function DUF2103, metal-binding) 12..92 Tax=ACD80
hypothetical protein
ACD80_115_6
ACD80, SR1, Bacteria

Not on your lists

8443..9390
-----------------
DNA (948bp)
protein (316aa)
hypothetical protein
seg (db=Seg db_id=seg from=172 to=183)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=22 to=255 evalue=1.4e-22)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=71 to=314 evalue=1.1e-21)
cov. pattern consistent with acd80 Jill Banfield (11/16/12)
ACD80_115_7
ACD80, SR1, Bacteria

Not on your lists

9437..9955
-----------------
DNA (519bp)
protein (173aa)
9437..9955 + ( gc_cont=0.322)
hypothetical protein Tax=ACD80
ACD80_115_8
ACD80, SR1, Bacteria

Not on your lists

comp(10014..10421)
-----------------
DNA (408bp)
protein (136aa)
10014..10421 - ( gc_cont=0.343)
hypothetical protein Tax=ACD80
Displaying 9 items

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