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NECEvent2014_8_3_scaffold_343_21

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(20644..20952)

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI0002894AB7 similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 92.0
  • Bit_score: 106
  • Evalue 1.30e-20
PadR family transcriptional regulator {ECO:0000313|EMBL:EUJ17456.1}; TaxID=1265818 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria aquatica FSL S10-1188. similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 92.0
  • Bit_score: 102
  • Evalue 3.40e-19
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 94.0
  • Bit_score: 99
  • Evalue 7.50e-19

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Taxonomy

Listeria aquatica → Listeria → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 309
ATGGATGGTGTAATTCTTAAAATTATAAATAATAAAACGACCTACGGATATGAAATATACGAAACATTACAAGAGTTAGGTTTCACAGAGCTTGCTGAAGGCTCATTTTATCAACTATTATTAAGACTAGAGAAGAAAAAGTTAATTAAGGGCACTAAGAGACCCTCCCCTTTATGACCATGTAGAAAATACTACTCTCTTACCTCAGAAGGAGTAGAAGAAATGGAAAACTTTAAAATATCTTGGGATAAAATTAATTCGGAAGTTTCAAAACTTTGTATGTGAAATAATATTTATAAAAAGCCTTAG
PROTEIN sequence
Length: 103
MDGVILKIINNKTTYGYEIYETLQELGFTELAEGSFYQLLLRLEKKKLIKGTKRPSPL*PCRKYYSLTSEGVEEMENFKISWDKINSEVSKLCM*NNIYKKP*