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NECEvent2014_8_3_scaffold_77

Alias: 178_003_scaffold_77

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_77_1
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48..680)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D324_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90703.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NECEvent2014_8_3_scaffold_77_2
unknown

Not on your lists

comp(746..988)
DNA (243bp) protein (81aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_3
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(1092..1652)
DNA (561bp) protein (187aa)
Hypothetical secreted protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EXC8_9FIRM
Hypothetical secreted protein {ECO:0000313|EMBL:CDB01789.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
NECEvent2014_8_3_scaffold_77_4
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1664..2074)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D1R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90705.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NECEvent2014_8_3_scaffold_77_5
unknown

Not on your lists

comp(2163..2405)
DNA (243bp) protein (81aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_6
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2482..3291)
DNA (810bp) protein (270aa)
Bacterial type II secretion system protein F domain n=1 Tax=Clostridium sp. CAG:91 RepID=R6WFL4_9CLOT
Bacterial type II secretion system protein F domain {ECO:0000313|EMBL:CDD02961.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental sa
Bacterial type II secretion system protein F domain.
NECEvent2014_8_3_scaffold_77_7
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3291..4265)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CJN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90709.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
NECEvent2014_8_3_scaffold_77_8

Not on your lists

comp(4614..4784)
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:AJA42843.1}; TaxID=1567011 species="Viruses; unclassified phages.;" source="Clostridium phage phiCT19406C.;"
NECEvent2014_8_3_scaffold_77_9
unknown

Not on your lists

comp(5095..5271)
DNA (177bp) protein (59aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5210..6421)
DNA (1212bp) protein (404aa)
Flp pilus assembly protein, ATPase CpaF n=1 Tax=Eubacterium rectale M104/1 RepID=D4JQ62_9FIRM
Flp pilus assembly protein, ATPase CpaF
Flp pilus assembly protein, ATPase CpaF {ECO:0000313|EMBL:CBK95231.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale
NECEvent2014_8_3_scaffold_77_11
unknown

Not on your lists

comp(6550..6810)
DNA (261bp) protein (87aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_12
unknown

Not on your lists

comp(6896..7504)
DNA (609bp) protein (203aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7764..8744
DNA (981bp) protein (327aa)
LexA repressor n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVJ3_CLOPF
LexA repressor {ECO:0000313|EMBL:EDT14279.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
transcription regulator phage-related
NECEvent2014_8_3_scaffold_77_14
unknown

Not on your lists

comp(8760..9161)
DNA (402bp) protein (134aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9145..9906)
DNA (762bp) protein (254aa)
DNA adenine methylase Dam n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SW51_9CLOT
DNA adenine methylase Dam {ECO:0000313|EMBL:EKQ50278.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34
DNA adenine methylase
NECEvent2014_8_3_scaffold_77_16
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10098..11207)
DNA (1110bp) protein (370aa)
Protein RecA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EK68_9CLOT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1351755 species="Bacteria; Firmicut
recA; protein RecA
NECEvent2014_8_3_scaffold_77_17
unknown

Not on your lists

comp(11599..11757)
DNA (159bp) protein (53aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11957..13090)
DNA (1134bp) protein (378aa)
DNA (Cytosine-5-)-methyltransferase n=5 Tax=Clostridium difficile RepID=G6B8F7_CLODI rbh
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EHJ29111.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
hypothetical protein
NECEvent2014_8_3_scaffold_77_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13515..13811)
DNA (297bp) protein (99aa)
Helix-turn-helix domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTE5_9CLOT
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EOR19980.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sar
helix-turn-helix domain-containing protein
NECEvent2014_8_3_scaffold_77_20
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13927..14271)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BYE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR19981.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_8_3_scaffold_77_21
unknown

Not on your lists

comp(14541..14750)
DNA (210bp) protein (70aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_22
unknown

Not on your lists

comp(15028..15285)
DNA (258bp) protein (86aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_23
Clostridium haemolyticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15297..16217)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3DIK4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGN03869.1}; TaxID=1443115 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium haemolyticum NCTC 8350
NECEvent2014_8_3_scaffold_77_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16412..16999)
DNA (588bp) protein (196aa)
Resolvase domain containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M138_9CLOT
Resolvase {ECO:0000313|EMBL:KIL07601.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
gin; DNA-invertase Gin
NECEvent2014_8_3_scaffold_77_25
unknown

Not on your lists

comp(17242..19059)
DNA (1818bp) protein (606aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_26
unknown

Not on your lists

19624..20358
DNA (735bp) protein (245aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_27
unknown

Not on your lists

comp(20501..20677)
DNA (177bp) protein (59aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_28
unknown

Not on your lists

comp(20679..21071)
DNA (393bp) protein (131aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_77_29
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21119..22393)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDK9_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFW03866.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Secreted protein
NECEvent2014_8_3_scaffold_77_30
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22393..22854)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03867.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
hypothetical protein
Displaying items 1-30 of 51 in total

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