ggKbase home page

NECEvent2014_8_4_scaffold_23

Alias: 178_004_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_23_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..115
DNA (114bp) protein (38aa)
Rubrerythrin (Fragment) n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CL12_9CLOT
Reverse rubrerythrin-1 {ECO:0000313|EMBL:EJZ50504.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative rubperoxin
NECEvent2014_8_4_scaffold_23_2
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(140..1087)
DNA (948bp) protein (316aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WDF6_DESOD
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AET67925.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.
NECEvent2014_8_4_scaffold_23_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1250..2683
DNA (1434bp) protein (478aa)
cls1; cardiolipin synthase Cls (EC:2.7.8.-)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1345695 species="Bacteria; Firmicutes
Cardiolipin synthase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLK0_CLOSA
NECEvent2014_8_4_scaffold_23_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3019..4032
DNA (1014bp) protein (338aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDS09021.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EDS09021.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae;
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHQ3_9FIRM rbh
NECEvent2014_8_4_scaffold_23_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4051..5115
DNA (1065bp) protein (355aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1151372 species="Bacteri
3-dehydroquinate synthase n=1 Tax=Clostridium difficile P38 RepID=T4PN73_CLODI rbh
aroB; 3-dehydroquinate synthase
NECEvent2014_8_4_scaffold_23_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5115..6413
DNA (1299bp) protein (433aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MC93_9CLOT
NECEvent2014_8_4_scaffold_23_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6391..7485
DNA (1095bp) protein (365aa)
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
Chorismate synthase n=1 Tax=Clostridium difficile CD69 RepID=T3A6P0_CLODI rbh
NECEvent2014_8_4_scaffold_23_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7473..8612
DNA (1140bp) protein (380aa)
Chorismate mutase n=2 Tax=Clostridium butyricum RepID=M8JNE4_CLOBU
Chorismate mutase {ECO:0000313|EMBL:ENZ35536.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_4_scaffold_23_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8623..9429
DNA (807bp) protein (269aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=12 Tax=Clostridium difficile RepID=C9XT73_CLODC rbh
aroE; shikimate dehydrogenase
NECEvent2014_8_4_scaffold_23_10
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9445..9960
DNA (516bp) protein (172aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia;
Shikimate kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XSI9_9CLOT
shikimate kinase family protein
NECEvent2014_8_4_scaffold_23_11
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9965..10393
DNA (429bp) protein (143aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|H
3-dehydroquinate dehydratase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G3L9_CLOPA
3-dehydroquinate dehydratase
NECEvent2014_8_4_scaffold_23_12
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10494..11531
DNA (1038bp) protein (346aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase AroF (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase AroF {ECO:0000313|EMBL:AGF59048.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AGF59048.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
Phospho-2-dehydro-3-deoxyheptonate aldolase AroF n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MSB8_9CLOT
NECEvent2014_8_4_scaffold_23_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11552..12385
DNA (834bp) protein (278aa)
tyrA; prephenate dehydrogenase TyrA (EC:1.3.1.12)
Prephenate dehydrogenase TyrA {ECO:0000313|EMBL:AGF59047.1}; EC=1.3.1.12 {ECO:0000313|EMBL:AGF59047.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
Prephenate dehydrogenase TyrA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N6L6_9CLOT
NECEvent2014_8_4_scaffold_23_14
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12491..13024)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ02634.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
CYTH domain protein
NECEvent2014_8_4_scaffold_23_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13193..13900
DNA (708bp) protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=457396 species="Bacteria
Purine nucleoside phosphorylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H757_9CLOT rbh
deoD; purine nucleoside phosphorylase
NECEvent2014_8_4_scaffold_23_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13936..14709
DNA (774bp) protein (258aa)
srtB; sortase, SrtB family (EC:3.4.22.71)
Sortase, SrtB family {ECO:0000313|EMBL:AIY84337.1}; EC=3.4.22.71 {ECO:0000313|EMBL:AIY84337.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q0A1_9CLOT
NECEvent2014_8_4_scaffold_23_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14883..16475
DNA (1593bp) protein (531aa)
Na/Pi cotransporter n=1 Tax=Clostridium sp. JC122 RepID=UPI0002885DFD
Na/Pi-cotransporter family protein/PhoU family protein
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:KIL09207.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.
NECEvent2014_8_4_scaffold_23_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16550..17590
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEW4_9CLOT rbh
37-kD nucleoid-associated bacterial family protein
37-kD nucleoid-associated bacterial family protein {ECO:0000313|EMBL:AIY84231.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_8_4_scaffold_23_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17650..18690)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H530_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99286.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
apbE family protein
NECEvent2014_8_4_scaffold_23_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18795..19241)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99285.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_4_scaffold_23_21
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19598..21469
DNA (1872bp) protein (624aa)
NADH dehydrogenase n=1 Tax=Clostridium intestinale URNW RepID=U2NSJ4_9CLOT rbh
NADH dehydrogenase {ECO:0000313|EMBL:ERK32143.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
pyridine nucleotide-disulfide oxidoreductase family protein
NECEvent2014_8_4_scaffold_23_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21598..21996
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8S8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99283.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_4_scaffold_23_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22009..22536
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20269.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_8_4_scaffold_23_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22539..23504
DNA (966bp) protein (322aa)
Trans-hexaprenyltranstransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT72_9CLOT rbh
Trans-hexaprenyltranstransferase {ECO:0000313|EMBL:EOR20268.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme
polyprenyl synthetase family protein
NECEvent2014_8_4_scaffold_23_25
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23513..24400)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTC9_9CLOT
LysR family transcriptional regulator {ECO:0000313|EMBL:EOR20267.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagof
putative Transcriptional regulator
NECEvent2014_8_4_scaffold_23_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24529..25695
DNA (1167bp) protein (389aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZ51_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EHI97403.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
ABC-type sugar transport system periplasmic component-like protein
NECEvent2014_8_4_scaffold_23_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25657..26784)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8S6_9CLOT rbh
Glycosyl transferase {ECO:0000313|EMBL:KJU73110.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
glycosyl transferases group 1 family protein
NECEvent2014_8_4_scaffold_23_28
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26906..27901
DNA (996bp) protein (332aa)
Spore coat protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FYZ9_CLOPA
spore coat protein, CotS family
Spore coat protein {ECO:0000313|EMBL:ETD69081.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
NECEvent2014_8_4_scaffold_23_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27943..28647
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TJK9_CLOBB
hypothetical protein
Spore coat protein {ECO:0000313|EMBL:CDH89399.1}; Uncharacterized protein {ECO:0000313|EMBL:ACD23102.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
NECEvent2014_8_4_scaffold_23_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28664..29719
DNA (1056bp) protein (352aa)
Spore coat protein, CotS family n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZG5_CLOBA
CotS family spore coat protein
Spore coat protein {ECO:0000313|EMBL:KIL08727.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
Displaying items 1-30 of 75 in total

View Taxonomy