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NECEvent2014_8_4_scaffold_143

Alias: 178_004_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_143_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_143_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90..503)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y363_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU70767.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_4_scaffold_143_3
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

733..966
DNA (234bp) protein (78aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CL89_9FIRM
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:ERI91274.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0
hydrogenase assembly chaperone hypC/hupF
NECEvent2014_8_4_scaffold_143_4
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

963..2033
DNA (1071bp) protein (357aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D3D8_9FIRM rbh
Hydrogenase isoenzymes formation protein HypD {ECO:0000313|EMBL:KAJ53358.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypD; hypD hydrogenase expression/formation protein HypD
NECEvent2014_8_4_scaffold_143_5
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2048..3049
DNA (1002bp) protein (334aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EEV9_9FIRM rbh
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ERI91276.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 st
hydrogenase expression/formation protein HypE
NECEvent2014_8_4_scaffold_143_6
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3066..3446
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Caloramator australicus RC3 RepID=I7K718_9CLOT
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:KAJ53360.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum
NECEvent2014_8_4_scaffold_143_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3461..4543
DNA (1083bp) protein (361aa)
Respiratory-chain NADH dehydrogenase, subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QP99_9CLOT rbh
Respiratory-chain NADH dehydrogenase, subunit {ECO:0000313|EMBL:EKY29392.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
NiFe-hydrogenase III large subunit
NECEvent2014_8_4_scaffold_143_8
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4544..4885
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN42_9CLOT
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
hypA; hydrogenase nickel insertion protein HypA
NECEvent2014_8_4_scaffold_143_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4887..5537
DNA (651bp) protein (217aa)
Hydrogenase accessory protein HypB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN19_9CLOT rbh
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EKY29394.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM
hydrogenase accessory protein HypB
NECEvent2014_8_4_scaffold_143_10
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5549..6079
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KL63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74235.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_8_4_scaffold_143_11
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6079..6342
DNA (264bp) protein (88aa)
Putative Na(+)/H(+) antiporter subunit F n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNA5_9CLOT
Monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:KAJ53365.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium teta
monovalent cation/H+ antiporter subunit F
NECEvent2014_8_4_scaffold_143_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6339..6686
DNA (348bp) protein (116aa)
Monovalent cation/proton antiporter, MnhG/PhaG subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QPA3_9CLOT
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:EKY29397.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
Na(+)/H(+) antiporter subunit G
NECEvent2014_8_4_scaffold_143_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6679..6945
DNA (267bp) protein (89aa)
Monovalent cation/H+ antiporter subunit B domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN47_9CLOT
Monovalent cation/H+ antiporter subunit B domain protein {ECO:0000313|EMBL:EKY29398.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
membrane bound hydrogenase subunit MbhD
NECEvent2014_8_4_scaffold_143_14
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6942..7232
DNA (291bp) protein (97aa)
Monovalent cation/H+ antiporter subunit B domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN23_9CLOT
Na+/H+ antiporter MnhB subunit-related protein {ECO:0000313|EMBL:KAJ53368.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
membrane bound hydrogenase subunit MbhE
NECEvent2014_8_4_scaffold_143_15
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7219..7686
DNA (468bp) protein (156aa)
Membrane bound hydrogenase MbhF subunit n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU31_9CLOT
Na+/H+ antiporter MnhB subunit-related protein {ECO:0000313|EMBL:KAJ53368.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
monovalent cation/H+ antiporter subunit B
NECEvent2014_8_4_scaffold_143_16
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7676..8020
DNA (345bp) protein (115aa)
Putative Na(+)/H(+) antiporter subunit C n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNA9_9CLOT
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:KAJ53369.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium teta
monovalent cation/H+ antiporter subunit C
NECEvent2014_8_4_scaffold_143_17
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8017..9960
DNA (1944bp) protein (648aa)
Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 n=1 Tax=Clostridium sp. CAG:265 RepID=R6LJ86_9CLOT rbh
Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 {ECO:0000313|EMBL:CDB74242.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environm
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
NECEvent2014_8_4_scaffold_143_18
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9974..10954
DNA (981bp) protein (327aa)
NADH dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN52_9CLOT rbh
Respiratory-chain NADH dehydrogenase subunit 1 {ECO:0000313|EMBL:KAJ53371.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
cooK; carbon monoxide-induced hydrogenase subunit CooK
NECEvent2014_8_4_scaffold_143_19
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10969..11406
DNA (438bp) protein (146aa)
ech2C; Ech-type complex subunit Ech2C (EC:1.12.7.2)
NADH ubiquinone oxidoreductase, subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN29_9CLOT
Hydrogenase-4 subunit I {ECO:0000313|EMBL:KAJ53372.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.
NECEvent2014_8_4_scaffold_143_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11406..11864
DNA (459bp) protein (153aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU36_9CLOT
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDB15575.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental s
NADH-plastoquinone oxidoreductase subunit
NECEvent2014_8_4_scaffold_143_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12214..12732
DNA (519bp) protein (173aa)
GnaT-family acetyltransferase n=2 Tax=Clostridium botulinum B RepID=B2TKR8_CLOBB
GnaT-family acetyltransferase
GnaT-family acetyltransferase {ECO:0000313|EMBL:ACD22038.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain
NECEvent2014_8_4_scaffold_143_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12729..12893)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSC3_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42546.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_8_4_scaffold_143_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13090..14040
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V260_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL09075.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_4_scaffold_143_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14050..15096
DNA (1047bp) protein (349aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1345695 species="Bacteria; Firmicutes; Clostr
DNA polymerase IV n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWG0_CLOSA
NECEvent2014_8_4_scaffold_143_25
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15454..16620
DNA (1167bp) protein (389aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae
Tryptophan synthase beta chain n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJJ0_CELLD rbh
NECEvent2014_8_4_scaffold_143_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16753..19053
DNA (2301bp) protein (767aa)
Putative ATP-dependent protease n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q445_9CLOT rbh
Putative ATP-dependent protease {ECO:0000313|EMBL:EKY22774.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 178
ATP-dependent protease
NECEvent2014_8_4_scaffold_143_27
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19379..19714
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EYD3_9CLOT
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
spoIIAA; anti-sigma F factor antagonist
NECEvent2014_8_4_scaffold_143_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19728..20159
DNA (432bp) protein (144aa)
Anti-sigma F factor {ECO:0000256|HAMAP-Rule:MF_00637}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00637};; Stage II sporulation protein AB {ECO:0000256|HAMAP-Rule:MF_00637}; TaxID=1202534 species="Bacteri
spoIIAB; anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6B0_9CLOT
NECEvent2014_8_4_scaffold_143_29
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20171..20926
DNA (756bp) protein (252aa)
RNA polymerase sigma factor n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F8E7_9CLOT rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.
sigF; sporulation sigma factor SigF
NECEvent2014_8_4_scaffold_143_30
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21054..22208)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CF21_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR27853.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
3D domain protein
Displaying items 1-30 of 35 in total

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