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NECEvent2014_8_4_scaffold_247

Alias: 178_004_scaffold_247

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_247_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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461..1138
DNA (678bp) protein (226aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
ung; uracil-DNA glycosylase (EC:3.2.2.27)
Uracil-DNA glycosylase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MT54_9CLOT
NECEvent2014_8_4_scaffold_247_2
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1210..1425)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PZA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29094.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
NECEvent2014_8_4_scaffold_247_trna_2
unknown

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comp(1764..1836)
DNA (73bp)
transferRNA
NECEvent2014_8_4_scaffold_247_3
unknown

Not on your lists

comp(2018..2239)
DNA (222bp) protein (74aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_247_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2402..2896)
DNA (495bp) protein (165aa)
CarD family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CS54_CLOPF
Transcriptional regulator, CarD family {ECO:0000313|EMBL:EDT14652.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
CarD family transcriptional regulator
NECEvent2014_8_4_scaffold_247_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3196..3936
DNA (741bp) protein (247aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=457396 spec
NAD-dependent deacetylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6A4_9CLOT rbh
NAD-dependent deacetylase
NECEvent2014_8_4_scaffold_247_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4010..4444
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BRW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR19859.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_8_4_scaffold_247_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4544..5494)
DNA (951bp) protein (317aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGJ1_9CLOT
CAAX protease {ECO:0000313|EMBL:KJU71649.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
CAAX protease self-immunity family protein
NECEvent2014_8_4_scaffold_247_8
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5656..6897)
DNA (1242bp) protein (414aa)
Putative competence-damage inducible protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAR9_9CLOT rbh
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
cinA; putative competence-damage inducible protein CinA
NECEvent2014_8_4_scaffold_247_9
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7176..7799)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y6C0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03719.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
histidine phosphatase super family protein
NECEvent2014_8_4_scaffold_247_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7860..8807)
DNA (948bp) protein (316aa)
glcK; glucokinase GlcK (EC:2.7.1.2)
Glucokinase GlcK {ECO:0000313|EMBL:AGX45305.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AGX45305.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
Glucokinase GlcK n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXJ0_CLOSA rbh
NECEvent2014_8_4_scaffold_247_11
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8896..9132)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PYM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK28894.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
NECEvent2014_8_4_scaffold_247_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9291..11435)
DNA (2145bp) protein (715aa)
Translation elongation factor G n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4Z3_9CLOT rbh
Translation elongation factor G {ECO:0000313|EMBL:EEH99785.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;
fusA2; elongation factor G
NECEvent2014_8_4_scaffold_247_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11762..12166)
DNA (405bp) protein (135aa)
polysaccharide synthesis protein GtrA n=1 Tax=Clostridium beijerinckii RepID=UPI00030AF185
gtrA-like family protein
GtrA family protein {ECO:0000313|EMBL:AJG99564.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP)
NECEvent2014_8_4_scaffold_247_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12168..13133)
DNA (966bp) protein (322aa)
bactoprenol glucosyl transferase (EC:2.4.1.-)
Bactoprenol glucosyl transferase n=2 Tax=Clostridium botulinum RepID=B2TN90_CLOBB rbh
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:AIY79231.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinu
NECEvent2014_8_4_scaffold_247_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13156..14994)
DNA (1839bp) protein (613aa)
Lipoteichoic acid synthase-like YqgS n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N054_CLOSA rbh
yqgS2; lipoteichoic acid synthase-like YqgS
Lipoteichoic acid synthase-like YqgS {ECO:0000313|EMBL:AGX45311.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharob
NECEvent2014_8_4_scaffold_247_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15011..16516)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=U4P9U5_CLOBO rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACD23346.1}; Uncharacterized protein {ECO:0000313|EMBL:CDH92303.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
NECEvent2014_8_4_scaffold_247_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16686..18062
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNT4_CLOSA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42255.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_8_4_scaffold_247_18
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18078..18530)
DNA (453bp) protein (151aa)
Phosphotransbutyrylase n=1 Tax=Clostridium intestinale URNW RepID=U2NJ20_9CLOT
Phosphotransbutyrylase {ECO:0000313|EMBL:ERK28866.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
phosphotransbutyrylase
NECEvent2014_8_4_scaffold_247_19
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18594..19037)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TH63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ50455.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
hypothetical protein
NECEvent2014_8_4_scaffold_247_20
unknown

Not on your lists

comp(19133..19276)
DNA (144bp) protein (48aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_247_trna_1
unknown

Not on your lists

comp(19576..19648)
DNA (73bp)
transferRNA
Displaying 22 items

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